1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCAGGGTCACACTAGAAAGTGTTGTATTCAGTTTTGGCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTTgtaagtatgtttctagagttcaatttccattgtgtatcaggccactttcatcaattgcagggtcacactgacaaagttgtttgaaatcttctatacaatt...
species | Oryza sativa |
transcript | LOC_Os10g39670.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTT GCACTTGACATGATAAGAAGCAGAAGCATCCAAGCAATAATGGAGACAAATEST: gi|29664957|gb|CB661232.1|CB661232
genomic: GCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTTgtaagtatgt ... tcatgtgcagGCACTTGACATGATAAGAAGCAGAAGCATCCAAGCAATAATGGAGACAAAT
EST: GCACAATACTCATCAATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTT GCACTTGACATGATAAGAAGCAGAAGCATCCAAGCAATAATGGAGACAAATEST: gi|58656973|gb|CK045653.1|CK045653
genomic: GCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTTgtaagtatgt ... tcatgtgcagGCACTTGACATGATAAGAAGCAGAAGCATCCAAGCAATAATGGAGACAAAT
EST: GCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTT GCACTTGACATGATAAGAAGCAGAAGCATCCAAGCAATAATGGAGACAAATEST: gi|33675246|gb|CF303485.1|CF303485
genomic: GCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTTgtaagtatgt ... tcatgtgcagGCACTTGACATGATAAGAAGCAGAAGCATCCAAGCAATAATGGAGACAAAT
EST: GCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTACTACCCTT GCACTTGACATGATAAGAACCACAAGCATCCCAGCAATAATGGAGACAAATEST: gi|29664958|gb|CB661233.1|CB661233
genomic: GCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTTgtaagtatgt ... tcatgtgcagGCACTTGACATGATAAGAAGCAGAAGCATCCAAGCAATAATGGAGACAAAT
EST: GCACAATACTCATCAATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTT GCACTTGACATGATAAGAAGCAGAAGCATCCAAGCAATAATGGAGACAAAT
genomic: GCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTTgtaagtatgt ... tcatgtgcagGCACTTGACATGATAAGAAGCAGAAGCATCCAAGCAATAATGGAGACAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAGGGTCACACTAGAAAGTGTTGTATTCAGTTTTGGCACAATACTCATCGATCTTCTCAGTGGAAAGCGCATTCCTCCTACCCTTgtaagtatgtttctagagttcaatttccattgtgtatcaggccactttcatcaattgcagggtcacactgacaaagttgtttgaaatcttctatacaatt
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