Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTCTGAAGAAAGCTTTAGAGGATGGAGCAGACATGGATGAAGAAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaactgctgaatggtttagaatagaaatgaatcacgtaacacagattaaatacggatgtttgtagcaataaccaattgggtgaacttgtctgttttcag

Basic information

species Oryza sativa
transcript LOC_Os09g33810.5
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os09g33810.5 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM5G800734_T02 (Zea mays), 5'ss of exon 6
GGTCTGAAGAAAGCTTTAGAGGATGGAGCAGACATGGATGAAGAAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaactgctgaatggtttagaatagaaatgaatcacgtaacacagattaaatacggatgtttgtagcaataaccaattgggtgaac-ttgtctgttttcag
||| |||||||||||||||| | ||||||||||| |||||||||||| || ||||||||| |||| ||||||||||| ||||| || ||||||||| ||| | ||| |  |   | |  ||  |||||  || ||  ||||   |   |||  | || |        ||   ||   ||  || |    | |||| |   
GGTTTGAAGAAAGCTTTAGAAGGTGGAGCAGACAAGGATGAAGAAGATGCCGAGGGAAGACGGGCTTTACATTTTGCATGTGGCTATGGTGAGgtaagtgaatctgttatactttgttaaacggaaatagattacacaacatgcagctaatgtgaatatcc----tgatg--cagcaggacgaccaccatttgttatgt-
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86428055|gb|CI073152.1|CI073152
EST:     TGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: TGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86428071|gb|CI073168.1|CI073168
EST:     TGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: TGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|3768382|gb|AU032409.1|AU032409
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86421516|gb|CI057505.1|CI057505
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88989196|gb|CI042309.1|CI042309
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTAGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|38482356|gb|CF966398.1|CF966398
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88844544|gb|CI020391.1|CI020391
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|55411016|gb|CV723392.1|CV723392
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86854638|gb|CI258931.1|CI258931
EST:     AAGACGCTGAGGGAAGAAGGCCCTTACATTTTGCGTGTGCTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86420007|gb|CI054808.1|CI054808
EST:     AAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86823509|gb|CI256446.1|CI256446
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|33679151|gb|CF307390.1|CF307390
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|29670242|gb|CB666517.1|CB666517
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86420974|gb|CI056963.1|CI056963
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86604145|gb|CI114919.1|CI114919
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAATGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|14571303|gb|BI118671.1|BI118671
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGTGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88993229|gb|CI108857.1|CI108857
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTTTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88833140|gb|CI076623.1|CI076623
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|163928746|gb|EG714739.1|EG714739
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86435731|gb|CI106964.1|CI106964
EST:     AAGACTCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|29660377|gb|CB656652.1|CB656652
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86251235|gb|CI055368.1|CI055368
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|89192825|gb|CI050123.1|CI050123
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86491028|gb|CI133661.1|CI133661
EST:     TGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: TGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|163927361|gb|EG710669.1|EG710669
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88425700|gb|CI689351.1|CI689351
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88989675|gb|CI107364.1|CI107364
EST:     TTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: TTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86255937|gb|CI068386.1|CI068386
EST:     CATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: CATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|38478876|gb|CF963009.1|CF963009
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88830267|gb|CI076523.1|CI076523
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88216131|gb|CI215980.1|CI215980
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAA-CGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86542820|gb|CI183026.1|CI183026
EST:     AGACGCTGAGGGAAGAAGCGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88242949|gb|CI244071.1|CI244071
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88957476|gb|CI095417.1|CI095417
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86415425|gb|CI069828.1|CI069828
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86435961|gb|CI107194.1|CI107194
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|89188300|gb|CI115549.1|CI115549
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86592287|gb|CI250941.1|CI250941
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88331324|gb|CI675654.1|CI675654
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|87035310|gb|CI189932.1|CI189932
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88990644|gb|CI108031.1|CI108031
EST:     GGAAGAAGGNCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: GGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86427629|gb|CI072726.1|CI072726
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|89173754|gb|CI041647.1|CI041647
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88993453|gb|CI110274.1|CI110274
EST:     AAGACGCTGAGGGAAGAAGGCCCTAACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86256816|gb|CI061579.1|CI061579
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86869798|gb|CI316526.1|CI316526
EST:     AAGACGCTGAGGGAA-AA-GGCCTTACATTTGGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAAATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88219601|gb|CI219161.1|CI219161
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86431865|gb|CI085476.1|CI085476
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|10931371|gb|AU161645.1|AU161645
EST:     AAGACGCTGAGGGAAGAAGGNCCTTACATTTTGCGTGTGGTTNCGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|569414|gb|D40263.1|D40263
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTG
EST: gi|3107410|gb|D43150.1|D43150
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|29646145|gb|CB651152.1|CB651152
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|29627632|gb|CB632643.1|CB632643
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|29613549|gb|CB618562.1|CB618562
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88349307|gb|CI678284.1|CI678284
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|89182309|gb|CI113678.1|CI113678
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86522372|gb|CI162578.1|CI162578
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88246021|gb|CI245870.1|CI245870
EST:     GACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: GACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86545876|gb|CI186082.1|CI186082
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88321125|gb|CI532875.1|CI532875
EST:     GCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTNAAATGCGCAGAGATCCTTCTGGAGGCAGGTNCTGCTGTAAACGCACTG
genomic: GCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86253374|gb|CI058299.1|CI058299
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86415415|gb|CI069818.1|CI069818
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86509910|gb|CI152543.1|CI152543
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86488402|gb|CI131035.1|CI131035
EST:     GCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: GCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86252275|gb|CI056012.1|CI056012
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86435689|gb|CI106922.1|CI106922
EST:     AAGACGCTGAGGGAAGAAGGCCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|89173873|gb|CI041766.1|CI041766
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|568989|gb|D39838.1|D39838
EST:     AAGACGCTNAGGGAAGAAGGGCCTTACATTTTGCGTNTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTNCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86434945|gb|CI106178.1|CI106178
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88828891|gb|CI073761.1|CI073761
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|89169793|gb|CI110152.1|CI110152
EST:     AAGACGCTGAGGGAAGAAGGGCCGTACATTGTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88216154|gb|CI216003.1|CI216003
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGT-AACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86892732|gb|CI312082.1|CI312082
EST:     AGACGCTGAAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AGACGCTG-AGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86412888|gb|CI067293.1|CI067293
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88989321|gb|CI043820.1|CI043820
EST:     TACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: TACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|89188263|gb|CI115512.1|CI115512
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86424805|gb|CI063566.1|CI063566
EST:     GCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: GCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86490847|gb|CI133480.1|CI133480
EST:     CGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: CGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88956597|gb|CI092806.1|CI092806
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|29663971|gb|CB660246.1|CB660246
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86419223|gb|CI054024.1|CI054024
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACA-TTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86489972|gb|CI132605.1|CI132605
EST:     CATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: CATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|27554136|gb|CA998036.1|CA998036
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|89179792|gb|CI044071.1|CI044071
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|8857115|gb|AU094433.1|AU094433
EST:     AAGACG-TGA-GGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTAAG                         TTGAAATGCGCAGAGATCCTTCTGAAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|86255769|gb|CI066832.1|CI066832
EST:     AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|88728139|gb|CI751649.1|CI751649
EST:     AGACGCTGAGGGAAGAAAGGGC-TTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
genomic: AGACGCTGAGGGAAGAA-GGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: gi|15852425|gb|BI805221.1|BI805221
EST:     AGACGCTGAGGGAAGAAGGGCCTTTACATTTTGCGTGTGGTTACGGTGAG                         TTGAAATGCGCCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACT
genomic: AGACGCTGAGGGAAGAAGGGCC-TTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCG-CAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 73 (upstream exon), 75 (downstream exon)
Score: 125

GGTCTGAAGAAAGCTTTAGAGGATGGAGCAGACATGGATGAAGAAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGGATAAGAACAAGAACACCCCACTGCATTACGCTGCTGGATATGGTCGGA




<











<


<









Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGTCTGAAGAAAGCTTTAGAGGATGGAGCAGACATGGATGAAGAAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaactgctgaatggtttagaatagaaatgaatcacgtaacacagattaaatacggatgtttgtagcaataaccaattgggtgaacttgtctgttttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG