1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TCAACAGGGTCTGAAGAAAGCTTTAGAGGATGGAGCAGACATGGATGAAGAAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaactgctgaatggtttagaatagaaatgaatcacgtaacacagattaaatacggatgtttgtagcaataaccaattgggtgaacttgtctgttttcag
species | Oryza sativa |
transcript | LOC_Os09g33810.4 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86428071|gb|CI073168.1|CI073168
genomic: TGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: TGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86421516|gb|CI057505.1|CI057505
genomic: TGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86415425|gb|CI069828.1|CI069828
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88989196|gb|CI042309.1|CI042309
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTAGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86420007|gb|CI054808.1|CI054808
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88844544|gb|CI020391.1|CI020391
genomic: AAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86604145|gb|CI114919.1|CI114919
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAATGCACTGEST: gi|86420974|gb|CI056963.1|CI056963
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88216131|gb|CI215980.1|CI215980
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGT-AACGCACTGEST: gi|86435731|gb|CI106964.1|CI106964
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACTCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|87035310|gb|CI189932.1|CI189932
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86251235|gb|CI055368.1|CI055368
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86491028|gb|CI133661.1|CI133661
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: TGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|163927361|gb|EG710669.1|EG710669
genomic: TGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88989675|gb|CI107364.1|CI107364
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: TTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88242949|gb|CI244071.1|CI244071
genomic: TTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86255937|gb|CI068386.1|CI068386
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: CATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88830267|gb|CI076523.1|CI076523
genomic: CATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86542820|gb|CI183026.1|CI183026
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AGACGCTGAGGGAAGAAGCGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88957476|gb|CI095417.1|CI095417
genomic: AGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86435961|gb|CI107194.1|CI107194
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86823509|gb|CI256446.1|CI256446
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86854638|gb|CI258931.1|CI258931
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGCCCTTACATTTTGCGTGTGCTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|29678144|gb|CB674419.1|CB674419
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|89188300|gb|CI115549.1|CI115549
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86592287|gb|CI250941.1|CI250941
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88216154|gb|CI216003.1|CI216003
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGT-AACGCACTGEST: gi|88990644|gb|CI108031.1|CI108031
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: GGAAGAAGGNCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86427629|gb|CI072726.1|CI072726
genomic: GGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|89173754|gb|CI041647.1|CI041647
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88993453|gb|CI110274.1|CI110274
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGCCCTAACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86869798|gb|CI316526.1|CI316526
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAA-AA-GGCCTTACATTTGGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAAATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86431865|gb|CI085476.1|CI085476
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88219601|gb|CI219161.1|CI219161
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|89182309|gb|CI113678.1|CI113678
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86522372|gb|CI162578.1|CI162578
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88246021|gb|CI245870.1|CI245870
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: GACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86545876|gb|CI186082.1|CI186082
genomic: GACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88321125|gb|CI532875.1|CI532875
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: GCCTTACATTTTGCGTGTGGTTACGGTGAG TTNAAATGCGCAGAGATCCTTCTGGAGGCAGGTNCTGCTGTAAACGCACTGEST: gi|86253374|gb|CI058299.1|CI058299
genomic: GCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|3760233|gb|C97489.1|C97489
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACNCTGAGGGAAGAAGGCCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCNCTGEST: gi|86509910|gb|CI152543.1|CI152543
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86488402|gb|CI131035.1|CI131035
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: GCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86252275|gb|CI056012.1|CI056012
genomic: GCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86435689|gb|CI106922.1|CI106922
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGCCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|89173873|gb|CI041766.1|CI041766
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86434945|gb|CI106178.1|CI106178
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88828891|gb|CI073761.1|CI073761
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|89169793|gb|CI110152.1|CI110152
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCGTACATTGTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|89192825|gb|CI050123.1|CI050123
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|29617933|gb|CB622945.1|CB622945
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86412888|gb|CI067293.1|CI067293
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88989321|gb|CI043820.1|CI043820
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: TACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|10931371|gb|AU161645.1|AU161645
genomic: TACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGNCCTTACATTTTGCGTGTGGTTNCGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|89188263|gb|CI115512.1|CI115512
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86424805|gb|CI063566.1|CI063566
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: GCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86490847|gb|CI133480.1|CI133480
genomic: GCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: CGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|88956597|gb|CI092806.1|CI092806
genomic: CGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86419223|gb|CI054024.1|CI054024
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACA-TTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86489972|gb|CI132605.1|CI132605
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: CATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|27554136|gb|CA998036.1|CA998036
genomic: CATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|89179792|gb|CI044071.1|CI044071
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|8857115|gb|AU094433.1|AU094433
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACG-TGA-GGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTAAG TTGAAATGCGCAGAGATCCTTCTGAAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|86255769|gb|CI066832.1|CI066832
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTGEST: gi|15852425|gb|BI805221.1|BI805221
genomic: AAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCGCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACTG
EST: AGACGCTGAGGGAAGAAGGGCCTTTACATTTTGCGTGTGGTTACGGTGAG TTGAAATGCGCCAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACT
genomic: AGACGCTGAGGGAAGAAGGGCC-TTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaa ... ctgttttcagTTGAAATGCG-CAGAGATCCTTCTGGAGGCAGGTGCTGCTGTAAACGCACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAACAGGGTCTGAAGAAAGCTTTAGAGGATGGAGCAGACATGGATGAAGAAGACGCTGAGGGAAGAAGGGCCTTACATTTTGCGTGTGGTTACGGTGAGgtatgtggaactgctgaatggtttagaatagaaatgaatcacgtaacacagattaaatacggatgtttgtagcaataaccaattgggtgaacttgtctgttttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG