1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggttattactattactgtgcacatggtttgactataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacag
species | Oryza sativa |
transcript | LOC_Os05g41930.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86833899|gb|CI338270.1|CI338270
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88502219|gb|CI429725.1|CI429725
genomic: TACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86528372|gb|CI168578.1|CI168578
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|33655764|gb|CF278378.1|CF278378
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29676071|gb|CB672346.1|CB672346
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|89182537|gb|CI113906.1|CI113906
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGGTAGACCTTTGCGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|38470564|gb|CF954695.1|CF954695
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATAGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTAAG ACCTTATCACTGCTAGACEST: gi|88511875|gb|CI439381.1|CI439381
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGAC
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88284115|gb|CI405561.1|CI405561
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: CTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29687868|gb|CB684143.1|CB684143
genomic: CTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88843118|gb|CI372018.1|CI372018
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: GCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGGCTGAG ACCTTATCACTGGTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAEST: gi|29676451|gb|CB672726.1|CB672726
genomic: GCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATA-GCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86874817|gb|CI325328.1|CI325328
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86415871|gb|CI029882.1|CI029882
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|15857889|gb|BI810701.1|BI810701
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: GTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88463257|gb|CI524567.1|CI524567
genomic: GTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: GAGCTCTCCATAGCTGAG ACCTTATCACTGGTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|218489639|gb|FG959075.1|FG959075
genomic: GAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88511874|gb|CI439380.1|CI439380
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88993492|gb|CI110313.1|CI110313
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88995692|gb|CI037073.1|CI037073
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCAACATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|58678238|gb|CK066925.1|CK066925
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29636231|gb|CB641240.1|CB641240
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88473414|gb|CI410685.1|CI410685
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: GATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|87006984|gb|CI275292.1|CI275292
genomic: GATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|18388677|gb|BM421875.1|BM421875
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCC-AAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|22307390|gb|BQ908612.1|BQ908612
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: GCACCATTACGATGGTCCACAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86843288|gb|CI341404.1|CI341404
genomic: GCACCATTACGATGGTCCA-AAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|22307916|gb|BQ909138.1|BQ909138
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|87029349|gb|CI250282.1|CI250282
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: GGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTTTTGAAEST: gi|88994584|gb|CI117736.1|CI117736
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88835720|gb|CI370825.1|CI370825
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29669163|gb|CB665438.1|CB665438
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29667743|gb|CB664018.1|CB664018
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29676329|gb|CB672604.1|CB672604
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|6431593|gb|AU081245.1|AU081245
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: CTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86823854|gb|CI258846.1|CI258846
genomic: CTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|41882529|gb|BX927965.1|BX927965
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29675861|gb|CB672136.1|CB672136
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|87015321|gb|CI275511.1|CI275511
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88488645|gb|CI425916.1|CI425916
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: CTCCATAGCTGAG ACCTTATCACTGGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAEST: gi|88214724|gb|CI214573.1|CI214573
genomic: CTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACT-GCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29642637|gb|CB647644.1|CB647644
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|7134957|gb|AU082757.1|AU082757
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86843256|gb|CI341391.1|CI341391
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|218500689|gb|FG944959.1|FG944959
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTT-CGGCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAAAAAGAAAGCGTCTGAACTGTTGEST: gi|29617826|gb|CB622838.1|CB622838
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTG
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|38475234|gb|CF959367.1|CF959367
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: ATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29642202|gb|CB647209.1|CB647209
genomic: ATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|218481318|gb|FG953310.1|FG953310
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|427037|gb|D23114.1|D23114
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29657474|gb|CB653749.1|CB653749
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88837795|gb|CI079155.1|CI079155
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86500670|gb|CI143303.1|CI143303
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29618262|gb|CB623274.1|CB623274
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86885539|gb|CI318690.1|CI318690
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG GCCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86881733|gb|CI324062.1|CI324062
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|218478865|gb|FG954592.1|FG954592
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCAATACGATGGTCCAAAGTTTCGTCATGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86604111|gb|CI114885.1|CI114885
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86831539|gb|CI299597.1|CI299597
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|89177808|gb|CI390987.1|CI390987
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTTAACTGTTGAAEST: gi|88964453|gb|CI055149.1|CI055149
genomic: TTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|14191944|gb|AU184155.1|AU184155
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: AAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTNTGAACTGTTGAAEST: gi|218497317|gb|FG959991.1|FG959991
genomic: AAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88273071|gb|CI388527.1|CI388527
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGA-AAAGAAGGCGTCTGAACTGTTGAAEST: gi|88429958|gb|CI562769.1|CI562769
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: GTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|22306853|gb|BQ908075.1|BQ908075
genomic: GTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|86430069|gb|CI082492.1|CI082492
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88458870|gb|CI555551.1|CI555551
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88828537|gb|CI073407.1|CI073407
genomic: TCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTCCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88220940|gb|CI220748.1|CI220748
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88964185|gb|CI045378.1|CI045378
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88480208|gb|CI417479.1|CI417479
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: AAGTTTCGTCTTGAGCTTTCCATAGCTGAG ACCTTATCACTGCTANACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29675022|gb|CB671297.1|CB671297
genomic: AAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88275149|gb|CI395753.1|CI395753
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88320516|gb|CI523259.1|CI523259
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88219581|gb|CI219141.1|CI219141
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88491596|gb|CI428868.1|CI428868
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|88275794|gb|CI396398.1|CI396398
genomic: TTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAEST: gi|29636278|gb|CB641287.1|CB641287
genomic: TTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggttattactattactgtgcacatggtttgactataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA