Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggttattactattactgtgcacatggtttgactataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacag

Basic information

species Oryza sativa
transcript LOC_Os05g41930.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os05g41930.1 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM2G011923_T01 (Zea mays), 5'ss of exon 5
CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt----tattactattactgtgcacatggtttg-actat-aatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacag
| |||| ||||| |||||||| |||||||||||| | ||||| |||||  ||||||| || ||||| ||||||||||| || ||||||||||| || ||||||| ||  |    |||      | |||||||||||  ||  || || || | | |  | || | |    || | |    ||  | |||  | ||||| |||  |                      
CGTTAGGAAGCTGTGCAAGCCGTTGGAAGAGGATTCCTTCAGGCCAGTTTTGCACCACTATGATGGCCCAAAGTTTCGCCTCGAGCTCTCCATCGCGGAGgtatatatatagcatatccagtctgctgtgcacatgaattatacaatgaaagctcccttgtgtaatgc--aacttc----cattagtgtcactatgcacactatgt---------------------

upper sequence: LOC_Os05g41930.1 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM2G033117_T01 (Zea mays), 5'ss of exon 5
CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgt-aggttattactat---------tactgtgcacatggtttgactataatgttactatatgcagtattgaattgcaca-----------acaaaaatgt---------ggccatgcaaactgagcaatatc-----atcttaaatttacag
|||||| ||||| |||||||| |||||||||||| | ||||| |||||  |||||||||| ||||| |||||||| || |||||||||||||| || ||||||| | | | | | | |||         ||  | |   |  |||||  | ||   ||     | || || |||  ||    |           | |||  |||         || ||||  |||        |       |  |||||| | |||
CATTAGGAAGCTGTGCAAGCCGTTGGAAGAGGATTCCTTCAGGCCAGTTTTGCACCATTATGATGGGCCAAAGTTCCGCCTTGAGCTCTCCATCGCGGAGgtatattatgctgtcattatagaagaagttatggggggtagagtttgtttgtagatttggcccaggctgttttgttttctctatgtttcatctcataaagttgttgtccagatggtcatgtgaaccagttctcacgcacggaatttaaatctgcag

upper sequence: LOC_Os05g41930.1 (Oryza sativa), 5'ss of exon 5
lower sequence: GLYMA19G25870.1 (Glycine max), 5'ss of exon 5
CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt-tattactattactgtgcacatggtttgact--ataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacag
  | || |||||||||||| | |||||||| ||| ||||||| |||||  |||| ||||| || || ||||||||||||||||| || ||  |  | |||||||| |||  |||| |||||       | |  |  | | |  || |  ||  | | | |  | |||  ||      ||   |||  |       || |    | | | ||   | |||  |||
TGTCAGGAAGCTCTGCAAGGCATTGGAAGAAGATTCTTTCAGGCCAGTATTGCATCATTATGACGGGCCAAAGTTTCGTCTTGAACTGTCAGTTCCAGAGgtatgaaggaatattgctattttaaactaaaaagaatcattccatgacattgatttgtccc-tgttggtttctgt--cattgatggagtgg----aatttgttattgttattggatatt-gcag

upper sequence: LOC_Os05g41930.1 (Oryza sativa), 5'ss of exon 5
lower sequence: GLYMA16G06100.1 (Glycine max), 5'ss of exon 5
CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt-tattactattactgtgcac-----atggtttgactataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaat-ttacag
  | || |||||||||||| | |||||||| ||| ||||||| |||||  |||| ||||| ||||| |||||||||||||||||||| ||  |  | |||||||| |||  | || |||||  | |  ||     |   |      || |  ||  | | | ||   |||  ||      |    |||  |       || |    | | | ||   | || || |||
TGTCAGGAAGCTCTGCAAGGCATTGGAAGAAGATTCTTTCAGGCCAGTATTGCATCATTATGATGGGCCAAAGTTTCGTCTTGAGCTGTCAGTTCCAGAGgtatgaaggaatgttgctatttttttaaactaaaaagaatcatttcatgacattgatttgt-caccgttggtttctgt--ctttgatggagtgg----aatttgttattgttattggatatattgcag

upper sequence: LOC_Os05g41930.1 (Oryza sativa), 5'ss of exon 5
lower sequence: PP1S168_104V6.2 (Physcomitrella patens), 5'ss of exon 5
CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatg-----taggttattactattactgtgcacatggtttgactataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacag
 ||| ||||||  || |||||||| ||||||||  | ||||| ||||||||||| || || ||||| || ||||| |||||| |||||||  |  | |||||||      ||  |  | |  |  || || | | | |||   ||       |  |  |   |||| ||| |||      |||  | ||    |    |                           
TATTCGAAAGCAGTGTAAGCCTTTAGAAGAGGACTCATTCAGGCCAGTGCTGCATCACTATGATGGGCCCAAGTTCCGTCTTCAGCTCTCTGTTCCAGAGgtatcatatttaactcttaaacacaaccgtccgcttcgttcagctcggtatcttgtgcaaagagtaatga-ttgagttgaaaatttatgatagtcagtatc-------------------------

upper sequence: LOC_Os05g41930.1 (Oryza sativa), 5'ss of exon 5
lower sequence: EFJ22023 (Selaginella moellendorffii), 5'ss of exon 4
CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggttattactattactgtgcacatggtttgactataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacag
  |||||| |  || ||||||| |||| |||||||||||| | || ||||| || || ||||| ||||| |||||||||||  |  | ||| |  | ||||| ||  |  |  |       || |  |  | ||||    ||    ||  | | | |  |  |   |||||                                                  
AGTTAGAATGAACTACAAGCCTCTGGAGGAGGATGCTTTCCGCCCCGTGCTCCATCACTACGACGGTCCCAAGTTTCGTCTCCAATTGTCCGTCCCAGAGgtgtgctg--tcctctctcggctcttgattttgtttc-tcatccctttggtttgttctttcgtcggttgcag-------------------------------------------------

upper sequence: LOC_Os05g41930.1 (Oryza sativa), 5'ss of exon 5
lower sequence: EFJ18285 (Selaginella moellendorffii), 5'ss of exon 4
CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggttattactattactgtgcacatggtttgactataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacag
  |||||| |  || ||||||| |||| |||||||||||| | || ||||| || || ||||| ||||| |||||||||||  |  | ||| |  | ||||| ||  |  |  |       || |  |  | ||||    ||    ||  | | | |  |  |   |||||                                                  
AGTTAGAATGAACTACAAGCCTCTGGAGGAGGATGCTTTCCGTCCCGTGCTCCATCACTACGACGGTCCCAAGTTTCGTCTCCAATTGTCCGTCCCAGAGgtgtgctg--tcctctctcggctcttgattttgtttc-tcatccctttggtttgttctttcgtcggttgcag-------------------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|55408708|gb|CV721084.1|CV721084
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86833899|gb|CI338270.1|CI338270
EST:     TACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88502219|gb|CI429725.1|CI429725
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86528372|gb|CI168578.1|CI168578
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|33655764|gb|CF278378.1|CF278378
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29676071|gb|CB672346.1|CB672346
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|89182537|gb|CI113906.1|CI113906
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGGTAGACCTTTGCGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|38470564|gb|CF954695.1|CF954695
EST:     TGCACCATTACGATAGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTAAG                         ACCTTATCACTGCTAGAC
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGAC
EST: gi|88511875|gb|CI439381.1|CI439381
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88284115|gb|CI405561.1|CI405561
EST:     CTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: CTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29687868|gb|CB684143.1|CB684143
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88843118|gb|CI372018.1|CI372018
EST:     GCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGGCTGAG                         ACCTTATCACTGGTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGA
genomic: GCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATA-GCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGA
EST: gi|29676451|gb|CB672726.1|CB672726
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86874817|gb|CI325328.1|CI325328
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86415871|gb|CI029882.1|CI029882
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|15857889|gb|BI810701.1|BI810701
EST:     GTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: GTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88463257|gb|CI524567.1|CI524567
EST:     GAGCTCTCCATAGCTGAG                         ACCTTATCACTGGTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: GAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|218489639|gb|FG959075.1|FG959075
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88511874|gb|CI439380.1|CI439380
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88993492|gb|CI110313.1|CI110313
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88995692|gb|CI037073.1|CI037073
EST:     TGCAACATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|58678238|gb|CK066925.1|CK066925
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29636231|gb|CB641240.1|CB641240
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88473414|gb|CI410685.1|CI410685
EST:     GATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: GATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|87006984|gb|CI275292.1|CI275292
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|18388677|gb|BM421875.1|BM421875
EST:     TGCACCATTACGATGGTCC-AAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|22307390|gb|BQ908612.1|BQ908612
EST:     GCACCATTACGATGGTCCACAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: GCACCATTACGATGGTCCA-AAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86843288|gb|CI341404.1|CI341404
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|22307916|gb|BQ909138.1|BQ909138
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|87029349|gb|CI250282.1|CI250282
EST:     GGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTTTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88994584|gb|CI117736.1|CI117736
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88835720|gb|CI370825.1|CI370825
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29669163|gb|CB665438.1|CB665438
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29667743|gb|CB664018.1|CB664018
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29676329|gb|CB672604.1|CB672604
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|6431593|gb|AU081245.1|AU081245
EST:     CTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: CTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86823854|gb|CI258846.1|CI258846
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|41882529|gb|BX927965.1|BX927965
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29675861|gb|CB672136.1|CB672136
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|87015321|gb|CI275511.1|CI275511
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88488645|gb|CI425916.1|CI425916
EST:     CTCCATAGCTGAG                         ACCTTATCACTGGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGA
genomic: CTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACT-GCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGA
EST: gi|88214724|gb|CI214573.1|CI214573
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29642637|gb|CB647644.1|CB647644
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|7134957|gb|AU082757.1|AU082757
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86843256|gb|CI341391.1|CI341391
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|218500689|gb|FG944959.1|FG944959
EST:     TGCACCATTACGATGGTCCAAAGTT-CGGCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAAAAAGAAAGCGTCTGAACTGTTG
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTG
EST: gi|29617826|gb|CB622838.1|CB622838
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|38475234|gb|CF959367.1|CF959367
EST:     ATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: ATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29642202|gb|CB647209.1|CB647209
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|218481318|gb|FG953310.1|FG953310
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|427037|gb|D23114.1|D23114
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29657474|gb|CB653749.1|CB653749
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88837795|gb|CI079155.1|CI079155
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86500670|gb|CI143303.1|CI143303
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29618262|gb|CB623274.1|CB623274
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86885539|gb|CI318690.1|CI318690
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         GCCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86881733|gb|CI324062.1|CI324062
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|218478865|gb|FG954592.1|FG954592
EST:     TGCACCAATACGATGGTCCAAAGTTTCGTCATGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86604111|gb|CI114885.1|CI114885
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86831539|gb|CI299597.1|CI299597
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|89177808|gb|CI390987.1|CI390987
EST:     TTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTTAACTGTTGAA
genomic: TTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88964453|gb|CI055149.1|CI055149
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|14191944|gb|AU184155.1|AU184155
EST:     AAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTNTGAACTGTTGAA
genomic: AAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|218497317|gb|FG959991.1|FG959991
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88273071|gb|CI388527.1|CI388527
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGA-AAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88429958|gb|CI562769.1|CI562769
EST:     GTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: GTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|22306853|gb|BQ908075.1|BQ908075
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|86430069|gb|CI082492.1|CI082492
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88458870|gb|CI555551.1|CI555551
EST:     TCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88828537|gb|CI073407.1|CI073407
EST:     TGCACCATTACGATGGTCCAAAGTTCCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88220940|gb|CI220748.1|CI220748
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88964185|gb|CI045378.1|CI045378
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88480208|gb|CI417479.1|CI417479
EST:     AAGTTTCGTCTTGAGCTTTCCATAGCTGAG                         ACCTTATCACTGCTANACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: AAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29675022|gb|CB671297.1|CB671297
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88275149|gb|CI395753.1|CI395753
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88320516|gb|CI523259.1|CI523259
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88219581|gb|CI219141.1|CI219141
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88491596|gb|CI428868.1|CI428868
EST:     TTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|88275794|gb|CI396398.1|CI396398
EST:     TTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
EST: gi|29636278|gb|CB641287.1|CB641287
EST:     TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAG                         ACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA
genomic: TGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 68 (upstream exon), 74 (downstream exon)
Score: 99

CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggt ... aaatttacagACCTTATCACTGCTAGACCTTTGTGAGAAAGAAGGCGTCTGAACTGTTGAAGAGGTGGTTGCTTTGAGGCTTTAGTACATATCGCTCTTGTATGTTGTGG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CATTAGAAAGCTCTGCAAGCCTTTGGAAGAGGATGCTTTCAGACCAGTGCTGCACCATTACGATGGTCCAAAGTTTCGTCTTGAGCTCTCCATAGCTGAGgtatgtaggttattactattactgtgcacatggtttgactataatgttactatatgcagtattgaattgcacaacaaaaatgtggccatgcaaactgagcaatatcatcttaaatttacag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGA