Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcactcgttgtctatctgcaattctcttgccctttcttacgtgctgcattaagtctagacttacaagaggaacggaaaattattctgctgctcc...

Basic information

species Oryza sativa
transcript LOC_Os05g38550.2
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os05g38550.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM2G007276_T01 (Zea mays), 5'ss of exon 4
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcactcgttgtctatctgcaattctcttgccctttctta---cgtgctgcattaagtctagacttacaagaggaacggaaaattattctgctgctcc
||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||| |        ||      |||||  |    |   |   |   ||||| ||  | |    ||          | |   |   ||     ||   
GTTGAAAGTATAGTTCTGAGCATCATTTCAATGCTCTCTAGTCCGAATGACGAGTCTCCAGCAAATATTGAAGCTGCCgtaagtgcaccctacaatattccctctctctctctctgggtaggaaaacaaactgcagtagttttt--tttgtcctgcttccagtgcaacgtttaaaagcgg-

upper sequence: LOC_Os05g38550.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM2G012052_T01 (Zea mays), 5'ss of exon 5
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcactcgttgtctatctgcaattctcttgccctttcttacgtgctgcattaagtctagacttacaagaggaacggaaaattattc--tgctgctcc
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| || |||||||||| ||   |   |||     |||||  | || |||  |     | |  ||   ||     | |||       |   |   | |  |||    ||
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGACGAGTCTCCAGCGAATATCGAAGCTGCCgtaagtgcacacggcattattctctctctctctctctctctctctctcatagga--aaacataattgcagaagttcttttgtgcagcttccagtgcaatgcc

upper sequence: LOC_Os05g38550.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GLYMA15G04470.1 (Glycine max), 5'ss of exon 5
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcactcgttgtctatctgcaattctctt-----gccctttcttacgtgctgcattaagtctag--acttacaag--aggaacggaaaattattctgctgctcc
|| || ||||||||  | || ||||| |||||||| |||||||| |||||||| |||||||||||| ||||||| || ||||||     | || | |   |  | ||   ||      || || | |  || ||   ||| | |||   | || ||    ||  | | |||  ||  |         
GTAGAGAGTATAGTATTAAGTATCATATCGATGCTTTCTAGTCCTAATGATGAATCTCCAGCAAATGTTGAAGCTGCGgtaagtttgaccattttgtgattctattttatttctgcaacctttccctcagtcctatcttatggctacttatttgcatcccagagaagaaaaggtaaac---------

upper sequence: LOC_Os05g38550.2 (Oryza sativa), 5'ss of exon 5
lower sequence: AT5G59300.1 (Arabidopsis thaliana), 5'ss of exon 5
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcactcgttgtctatctgcaattctcttgccctttcttacgtgctgcattaagtctagacttacaagaggaacggaaaattattctgctgctcc-
||||| |||||  |  |||| ||||| || ||||| ||| |||| || |||||||||||||||||| ||||||| || || |||       | |  |    |||  |  |||||  ||    | | || | |        |  ||||     |||         | ||||  ||| |  
GTTGAGAGTATTATGTTGAGTATCATATCAATGCTTTCTGGTCCTAACGATGAGTCTCCAGCAAATGTTGAAGCTGCCgtgagtatttcaatcgatttatcgcacatagcttgcaatt----aagagcagaac-------atgcttat----ggattttgtgtgttttctcttgcgcag

upper sequence: LOC_Os05g38550.2 (Oryza sativa), 5'ss of exon 5
lower sequence: Vv08s0007g00120.t01 (Vitis vinifera), 5'ss of exon 5
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcactcgttgtctatctgcaattctcttgccctttcttacgtgctgcattaagtctagacttacaagaggaacggaaaattattctgctgctcc-------
|||||||| |||||| |||| ||||| || ||||| || |||||||||||||| ||||| |||||||||||||| |||||||||  | |  |      |   |  |  ||| |   |   ||  |   | ||||   |    | | |||  |  | |  | | | ||| |||| ||||       
GTTGAAAGCATAGTTTTGAGTATCATATCAATGCTTTCAAGTCCAAATGATGAATCTCCTGCAAATATTGAAGCTGCTgtaagttaaattctgactcgttacc--tcatctagtattagtttggggattccattc--ttcttattaacatta--atctaacattaattttgct-ctccacatgta

upper sequence: LOC_Os05g38550.2 (Oryza sativa), 5'ss of exon 5
lower sequence: Vv06s0004g04430.t01 (Vitis vinifera), 5'ss of exon 5
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtg-cactc-gttgtctatc--tgcaattctctt------gccctttcttacgtgctgcatta--agtctagacttacaagaggaacggaaaattattctgctgctcc
||||||||||||||| |||| ||||| |||||||| || || || |||||||| || || ||||| |||||||| || ||||||| ||||  ||||| |  |    |||||||| |       |   |  |||  |   |  ||   | | ||   ||  | |  ||    |   | |            
GTTGAAAGTATAGTTTTGAGTATCATATCGATGCTTTCCAGCCCTAATGATGAATCACCTGCAAACATTGAAGCTGCAgtaagtgacacttagttgtatgccaccacaattctcctttggcaacttctctttatttatggtgtttgtaatttacttttctacgttgacaataggctga------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88842759|gb|CI371659.1|CI371659
EST:     AGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: AGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88277783|gb|CI398585.1|CI398585
EST:     TTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: TTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88474925|gb|CI412196.1|CI412196
EST:     GCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: GCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86524201|gb|CI164407.1|CI164407
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33686873|gb|CF315112.1|CF315112
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|8857893|gb|AU095211.1|AU095211
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|55442237|gb|CV734438.1|CV734438
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86425481|gb|CI070578.1|CI070578
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88278267|gb|CI399267.1|CI399267
EST:     CTCTAGTCCCAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86492846|gb|CI135479.1|CI135479
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCCAAGAAAAAGGTTAGACGCAT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTT-CAAGAAAAAGGTTAGACGCAT
EST: gi|33692575|gb|CF320814.1|CF320814
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCANATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86540527|gb|CI180733.1|CI180733
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88512315|gb|CI439821.1|CI439821
EST:     AAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: AAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|89192152|gb|CI393509.1|CI393509
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGAACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33655770|gb|CF278384.1|CF278384
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|29680264|gb|CB676539.1|CB676539
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88484776|gb|CI422047.1|CI422047
EST:     TCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: TCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33683398|gb|CF311637.1|CF311637
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88215114|gb|CI214963.1|CI214963
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|55434997|gb|CV730625.1|CV730625
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88255464|gb|CI354288.1|CI354288
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86258966|gb|CI004510.1|CI004510
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|55412106|gb|CV724482.1|CV724482
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|2310768|gb|C26923.1|C26923
EST:     CGATGCTCTCTAGTCCAAATNATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCANGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86870150|gb|CI318064.1|CI318064
EST:     CTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88439819|gb|CI541376.1|CI541376
EST:     TAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: TAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33653640|gb|CF276254.1|CF276254
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88474939|gb|CI412210.1|CI412210
EST:     CAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88244260|gb|CI243382.1|CI243382
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88385200|gb|CI561856.1|CI561856
EST:     TGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: TGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33810432|gb|CF331103.1|CF331103
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88272429|gb|CI386284.1|CI386284
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAAGGTTAGACGCAT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAG-AAAAAGGTTAGACGCAT
EST: gi|29673156|gb|CB669431.1|CB669431
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCGAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|3760646|gb|C97900.1|C97900
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86526293|gb|CI166499.1|CI166499
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33653883|gb|CF276497.1|CF276497
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|58679873|gb|CK068560.1|CK068560
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88463791|gb|CI527118.1|CI527118
EST:     CGATGCTCTTTAGTCCAAATGATGATTCTCCAGCAAATATTGAAGCGGGT                         AAGTATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88217686|gb|CI217535.1|CI217535
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|89196201|gb|CI397203.1|CI397203
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|15847906|gb|BI796182.1|BI796182
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88320343|gb|CI523086.1|CI523086
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88849506|gb|CI089414.1|CI089414
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33653639|gb|CF276253.1|CF276253
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCA
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCA
EST: gi|88243626|gb|CI244023.1|CI244023
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86512881|gb|CI155514.1|CI155514
EST:     CGAAGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|38470738|gb|CF954869.1|CF954869
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86842441|gb|CI335317.1|CI335317
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33658073|gb|CF280687.1|CF280687
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAA
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAA
EST: gi|33690681|gb|CF318920.1|CF318920
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86524483|gb|CI164689.1|CI164689
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|32948017|gb|BP184589.1|BP184589
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|286322|gb|D15130.1|D15130
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|89168485|gb|CI038839.1|CI038839
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33687042|gb|CF315281.1|CF315281
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|15855576|gb|BI808388.1|BI808388
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGC-GCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|313079586|gb|HO213144.1|HO213144
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGATGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33690680|gb|CF318919.1|CF318919
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86509843|gb|CI152476.1|CI152476
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|11565320|gb|AU165956.1|AU165956
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|29688854|gb|CB685129.1|CB685129
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33665462|gb|CF296429.1|CF296429
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86510357|gb|CI152990.1|CI152990
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88257783|gb|CI360369.1|CI360369
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86822730|gb|CI251810.1|CI251810
EST:     CGATGCTCCCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86430741|gb|CI083164.1|CI083164
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|29680263|gb|CB676538.1|CB676538
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88908350|gb|CI090943.1|CI090943
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|22306772|gb|BQ907994.1|BQ907994
EST:     GATGCTCTCTAGTCCACAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: GATGCTCTCTAGTCCA-AATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|66916172|gb|CX103020.1|CX103020
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88906898|gb|CI375970.1|CI375970
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCACCAAATATTGAACCGGCT                         AAGGATTGGAGGGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33658681|gb|CF281294.1|CF281294
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33654769|gb|CF277383.1|CF277383
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88297849|gb|CI553478.1|CI553478
EST:     AGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: AGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86524276|gb|CI164482.1|CI164482
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88463339|gb|CI524649.1|CI524649
EST:     TCCAAATGATGAGTCTCCACCAAATATTGAACCGGCT                         AAGGATTGGAGAGAAAAGATGGACGATTTCGAGAAAAAGGTTAGACGCATT
genomic: TCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|4880952|gb|AU065251.1|AU065251
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|8860045|gb|AU097363.1|AU097363
EST:     AAATATTGAAGCGGCT                         AAGGATTTGGAGAGCAAANGAGGGACGATTTCAAGAAAAAGGTTAGACGCA
genomic: AAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGA-TTGGAGAG-AAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCA
EST: gi|33687043|gb|CF315282.1|CF315282
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88506729|gb|CI434235.1|CI434235
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33658854|gb|CF281467.1|CF281467
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86432288|gb|CI085899.1|CI085899
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|29616092|gb|CB621104.1|CB621104
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86863021|gb|CI332379.1|CI332379
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|55414097|gb|CV726473.1|CV726473
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88205831|gb|CI205680.1|CI205680
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGCACAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|29685176|gb|CB681451.1|CB681451
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33655754|gb|CF278368.1|CF278368
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGA
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGA
EST: gi|88239904|gb|CI239066.1|CI239066
EST:     TCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: TCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33691669|gb|CF319908.1|CF319908
EST:     CGATGCTCTCTAGTCCAAAGGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAA
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAA
EST: gi|29684701|gb|CB680976.1|CB680976
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|29685177|gb|CB681452.1|CB681452
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|86534110|gb|CI174316.1|CI174316
EST:     CCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88847310|gb|CI011253.1|CI011253
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|33692576|gb|CF320815.1|CF320815
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|88273756|gb|CI394162.1|CI394162
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|29684702|gb|CB680977.1|CB680977
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
EST: gi|29688855|gb|CB685130.1|CB685130
EST:     CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCT                         AAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT
genomic: CGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 74 (upstream exon), 74 (downstream exon)
Score: 351

GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcac ... gctggtgcagAAGGATTGGAGAGAAAAGAGGGACGATTTCAAGAAAAAGGTTAGACGCATTGTTCGTAAATCACAGGAAATGCTCTGAAAGATAAGGAGCACAAGGGGGA




<











<


<









Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTTGAAAGTATAGTTCTGAGCATCATTTCGATGCTCTCTAGTCCAAATGATGAGTCTCCAGCAAATATTGAAGCGGCTgtaagtgcactcgttgtctatctgcaattctcttgccctttcttacgtgctgcattaagtctagacttacaagaggaacggaaaattattctgctgctcc

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC