Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttataattcgtgcttctgattttg...

Basic information

species Oryza sativa
transcript LOC_Os05g08960.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM2G110983_T03 (Zea mays), 5'ss of exon 3
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattt-tgtatcatgtttataattcgt--gcttctgattttg----
||||||||||||| ||||||||||||||||| || || || |||||||| || ||||||||||||||||| |||||||| || ||||||||| |     || |    |      ||    | | |  |     | |  ||||| || ||| |||| |   |  || || | || |     | |   | ||||    
TTTATGCTGATGGAAGCATATGCTTAGATATCCTGCAGAATCAGTGGAGTCCGATATATGATGTAGCTGCGATACTCACGTCAATCCAGgtaca----accatacaagaaatcttttatttcttacaagagattat--tgttt-ttccaacatttgtaacttttgcttgttatacagtaacattcaactttgcagt

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM2G110983_T02 (Zea mays), 5'ss of exon 4
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattt-tgtatcatgtttataattcgt--gcttctgattttg----
                           |||| || || || |||||||| || ||||||||||||||||| |||||||| || ||||||||| |     || |    |      ||    | | |  |     | |  ||||| || ||| |||| |   |  || || | || |     | |   | ||||    
---------------------------ATATCCTGCAGAATCAGTGGAGTCCGATATATGATGTAGCTGCGATACTCACGTCAATCCAGgtaca----accatacaagaaatcttttatttcttacaagagattat--tgttt-ttccaacatttgtaacttttgcttgttatacagtaacattcaactttgcagt

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GLYMA08G40860.1 (Glycine max), 5'ss of exon 5
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcctg--tcatgtttgttgcaatatt-ttgtatcatgtttataattcgtgcttctgattttg
||||||| ||||| || |||||||| || ||  ||||||| ||||||||||| ||||||||||||||||| || || || || ||||||||| ||  ||  |   ||     | | || ||  ||| | | ||    | ||| |       || || ||||||  |||  | | ||  |     |    || 
TTTATGCGGATGGCAGTATATGCTTGGACATTTTACAAAATCAGTGGAGCCCTATATATGATGTAGCTGCAATTCTTACCTCAATCCAGgta-attgtgattcacttaata-tttcagaattgcattaagaccatacttatgctaaaaatgattttattgtattctgtccacagtttattaaaatacaatt-

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GLYMA05G01270.1 (Glycine max), 5'ss of exon 5
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttataattcgtgcttctgattttg-----
||||||| ||||| || || || || |||||| |||||||||||||||| || |||||||||||||||||||||||||| || |||||||||     |  ||| | | |     | | ||  ||   || || | ||||   |  |  | ||| ||  |  |||   ||| |  |  | | |  ||||      
TTTATGCGGATGGAAGTATTTGTTTGGATATATTACAAAACCAGTGGAGTCCTATATATGATGTAGCTGCTATACTCACTTCTATCCAGgtat----tatcttgtatagtatagtcaacaattctacatatcttttcattccttctttagtatattacaa-atgaagatagtatgcacatatatttttacataa

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GLYMA06G20310.1 (Glycine max), 5'ss of exon 4
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtaga---tgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttataattcgtgcttctgattttg-
||||||||||||| || || || || |||||| ||||||| |||||||| || || |||||||| ||||||||||||||||| |||||||||     |  |   |  ||||    | |||  |    |  | |       || ||| || ||  |||   |   ||   || ||||  | | | || |||   
TTTATGCTGATGGAAGTATTTGTTTGGATATATTACAAAATCAGTGGAGTCCTATTTATGATGTGGCTGCTATACTCACATCTATCCAGgtatcatctagtatttcatttgtatattttacaaatgaaccaagcaagcagatattt-ttacatcattaaat-ctatccctagaatt--tccatttgctttcaa

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GLYMA17G10640.2 (Glycine max), 5'ss of exon 5
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttata-attcgtgcttctgattttg---
||||||| ||||| || || || || |||||| |||||||||||||||| || |||||||||||||||||||||||||| || |||||||||     |  ||| | | |     |   ||  ||   || || | |   || | || |||       || ||||   ||| ||         | | | |    
TTTATGCGGATGGAAGTATTTGTTTGGATATATTACAAAACCAGTGGAGTCCTATATATGATGTAGCTGCTATACTCACTTCTATCCAGgtat----tatcttgtatagtatagtctacaattctacatttcatctttagtatattacaaatgaagatagcatgcacatatatctacataattaactctacac

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: GLYMA04G34170.2 (Glycine max), 5'ss of exon 5
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtaga---tgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttataattcgtgcttctgattttg
||||||||||||| || || || || |||||||||||||| |||||||| || ||||||||||| ||||||||||||||||| |||||||||     |  |   || ||||    | |||  |    |  | |       || |||  | ||  |||   |   ||   || ||||     ||    |||  
TTTATGCTGATGGAAGTATTTGTTTGGATATACTACAAAATCAGTGGAGTCCTATATATGATGTGGCTGCTATACTCACATCTATCCAGgtatcatctagtattttatttgtatattttacaaatgaactaagcaagcagatattttgtacatcattaaat-ctatcactaaaattttcattttc--tttca

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: AT2G02760.1 (Arabidopsis thaliana), 5'ss of exon 5
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagat------gatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatg-tttataattcgtgcttctgattttg------------------------------------------------
|||||||||||||||| |||||||| || || || |||||||| ||||| || ||||| ||||| ||||||||||| || ||||| |||||| ||      ||    |  | | |   |  |     || |    ||    | ||  |||||    |  ||  |  | || | | | |  ||    | |||| |                                                  
TTTATGCTGATGGGAGTATATGCTTGGACATTCTCCAAAACCAATGGAGTCCAATATACGATGTCGCTGCTATACTAACCTCCATTCAGgtatatatacaagaaatgtcatatcgaaatgcttctcagtaaaaccgttg-atgattgttgttattctgcttcctcccctgatcttttacacggatctttgatctaatctgattacattagtggctaaacaatcgccgtcctttttttatcacag

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: AT1G14400.2 (Arabidopsis thaliana), 5'ss of exon 5
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttataattcgtgcttctgattttg---
||||||| |||||||| || ||||| || || ||||||||||||||||| || || |||||||| ||||||||||| || |||||||||||  ||      |          ||| | ||| || ||||| |||   | | |||      | | || |    |  |     ||  | | | || | |||   
TTTATGCAGATGGGAGTATCTGCTTGGACATTCTACAAAACCAGTGGAGTCCAATCTATGATGTTGCTGCTATACTTACCTCCATCCAGgtgaattcaaaatgcc------atatgaacatctcttgatgcccttaaaagcttgaattgctttcttcttctctaatcc--gtttttccctttgttattgcag

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: AT5G62540.1 (Arabidopsis thaliana), 5'ss of exon 5
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttataattcgtgcttctgattttg
||||||||||||| ||||| ||||| |||||  | |||||||||||||||||||| || || || |||||  | |||||||| || ||||    |  || ||| |   |   | ||    |||    || |  || |||  | |  |  ||   | | |  |     | |  |  || ||   |     
TTTATGCTGATGGAAGCATTTGCTTGGATATCTTGCAAAACCAGTGGAGCCCCATCTACGACGTTGCTGCAGTTCTCACATCAATTCAGg----ttttgacttct---gaattcttcatttgt----atcttttg-cattgtggaggttatgcat-gaactaaaccaagaccttttgttttacag----

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: Vv01s0026g01770.t01 (Vitis vinifera), 5'ss of exon 6
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttt-tgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttataattcgtgcttctgattttg
||||||| ||||| ||||| |||||||| || |||||||| |||||||| || || |||||||||||||| ||||| |||||||||||||||   |||   ||  | |    || |     |  ||| |  |     |||| |  ||  || ||     |       | | |    || || ||  ||| 
TTTATGCGGATGGAAGCATTTGCTTAGACATTCTACAAAATCAGTGGAGTCCAATTTATGATGTAGCTGCCATACTTACATCCATCCAGgtattggatatgttcatattattgtttggatgttgcatcaactgagaacatgatatttaaaacatgaaagaatgctgatttgacctatgtttttgccttt-

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: Vv17s0000g05820.t01 (Vitis vinifera), 5'ss of exon 5
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtag----atgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttataattcgtgcttctgattttg
| ||||| ||||| || || ||  | ||||| |||||||| |||||||| || |||||||||||||| |||||||| || || || ||||||     |  || |  || ||  | | || |   || |||  | |   || |    |  |   |     |  |  |     | |  |     |||  ||    
TCTATGCAGATGGAAGTATTTGTCTCGATATTCTACAAAATCAGTGGAGTCCTATATATGATGTAGCAGCTATACTTACGTCTATTCAGgtattgtcaatatacaattattatgtggataatgttgccattgtttttagttaacaattgtatgagggacttaactacaagaaaatgtgaccattcatat----

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: Vv14s0108g00140.t01 (Vitis vinifera), 5'ss of exon 6
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtag-atgatgccttttttgggggtattagcatgtcatgatgtcc-tgtcatgtttgttgcaatattttgtatca-tgtttataattcgtgcttctgattttg
| ||||| ||||| ||||| || || ||||| ||||| ||||||||||| |||||||||||||| |||||||| || || || |||||||||  |||  |  | |||    |    | || | | ||    |   |   || |    |      ||||| || | | ||||  ||  ||   | |||| |  
TATATGCCGATGGAAGCATCTGTTTGGATATTCTACAGAACCAGTGGAGTCCCATATATGATGTTGCTGCTATTCTTACTTCTATCCAGgtattatggggtttgtttgattgtcgattgctttttatttaattagtaaaatatccaatttctgtttttggatgaatatttaccat--gttactatgatata-

upper sequence: LOC_Os05g08960.2 (Oryza sativa), 5'ss of exon 5
lower sequence: Vv08s0032g00310.t01 (Vitis vinifera), 5'ss of exon 4
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcc-tgtcatgtt-tgttgcaatattttgtatcatgtttataattcgtgcttctgattttg---
||||||| ||||| || || ||||| |||||  |||| || |||||||| || ||||||||||| || ||||||||||| |||||||||||  |     |||||         ||||   | | |||   |    ||  |||  || |  |  ||||  |  ||  || ||  |  ||  | || | ||     
TTTATGCAGATGGAAGTATTTGCTTGGATATTTTACAGAATCAGTGGAGTCCTATATATGATGTGGCAGCTATACTCACTTCCATCCAGgtgaa-----cctttccacaaaaaattaattttttatggaataaacgttttgtcctgataaataatttactgacaccttgatgttatgttttgcttaattgaaat

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86877910|gb|CI320743.1|CI320743
EST:     ACCAGTGGAGCCCCATATATGATCTAGCTGCTATACTCACATCCATCCAG                         TCTCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88459715|gb|CI521975.1|CI521975
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88289955|gb|CI547592.1|CI547592
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88844273|gb|CI005646.1|CI005646
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88560256|gb|CI490902.1|CI490902
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88988531|gb|CI037767.1|CI037767
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|15850009|gb|BI798285.1|BI798285
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCC-AACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88564998|gb|CI495715.1|CI495715
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGTTCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88534854|gb|CI463613.1|CI463613
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|11172348|gb|AU164240.1|AU164240
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88454566|gb|CI509339.1|CI509339
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGTTCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|66915271|gb|CX102119.1|CX102119
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGGAAGCTGA
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTG-AAGCTGC
EST: gi|33677902|gb|CF306141.1|CF306141
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88241857|gb|CI241706.1|CI241706
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|25800383|gb|CA756344.1|CA756344
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCANACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88560096|gb|CI490726.1|CI490726
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88564684|gb|CI495401.1|CI495401
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGTTCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88540538|gb|CI468591.1|CI468591
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|218505588|gb|FG952847.1|FG952847
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86828978|gb|CI282739.1|CI282739
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88549169|gb|CI479031.1|CI479031
EST:     TATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: TATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88470831|gb|CI408102.1|CI408102
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88282016|gb|CI403412.1|CI403412
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88485225|gb|CI422496.1|CI422496
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|218493155|gb|FG956466.1|FG956466
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88547989|gb|CI478323.1|CI478323
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|33813641|gb|CF332707.1|CF332707
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88382236|gb|CI533440.1|CI533440
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|3767211|gb|AU031321.1|AU031321
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88525875|gb|CI452912.1|CI452912
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|29619509|gb|CB624521.1|CB624521
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88218009|gb|CI217858.1|CI217858
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86512221|gb|CI154854.1|CI154854
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88383725|gb|CI545876.1|CI545876
EST:     TGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: TGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|29619932|gb|CB624944.1|CB624944
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88450337|gb|CI544459.1|CI544459
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|33656466|gb|CF279080.1|CF279080
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTNTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88521977|gb|CI449702.1|CI449702
EST:     CATCCATCCAG                         TCGGTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: CATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88560784|gb|CI491479.1|CI491479
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88297132|gb|CI545222.1|CI545222
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|8857214|gb|AU094532.1|AU094532
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|87033452|gb|CI188076.1|CI188076
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88531902|gb|CI458423.1|CI458423
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88526482|gb|CI454547.1|CI454547
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86846693|gb|CI282930.1|CI282930
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88530423|gb|CI458818.1|CI458818
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88254065|gb|CI352691.1|CI352691
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88461309|gb|CI547489.1|CI547489
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88279200|gb|CI400200.1|CI400200
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88521939|gb|CI449661.1|CI449661
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88996140|gb|CI037431.1|CI037431
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCCAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|218504730|gb|FG949645.1|FG949645
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88532568|gb|CI462062.1|CI462062
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88550353|gb|CI480320.1|CI480320
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|29619508|gb|CB624520.1|CB624520
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|11025495|gb|AU162096.1|AU162096
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86872726|gb|CI341936.1|CI341936
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86509286|gb|CI151919.1|CI151919
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|89170236|gb|CI039513.1|CI039513
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|87030298|gb|CI252575.1|CI252575
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88301717|gb|CI503183.1|CI503183
EST:     ACCAGTGGGGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86510211|gb|CI152844.1|CI152844
EST:     ACCAGCGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88522156|gb|CI449894.1|CI449894
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|89170687|gb|CI039964.1|CI039964
EST:     TGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCGAATTCACCTGCCTACTCTGAAGCTGCC
genomic: TGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88454618|gb|CI509391.1|CI509391
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGTTCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88554928|gb|CI485143.1|CI485143
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|89170677|gb|CI039954.1|CI039954
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88565982|gb|CI496699.1|CI496699
EST:     CCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGTTCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: CCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86509514|gb|CI152147.1|CI152147
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88466802|gb|CI542379.1|CI542379
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88564105|gb|CI494822.1|CI494822
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGTTCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88297594|gb|CI550657.1|CI550657
EST:     TATAGTCACATCCATCCAT                         TCGCTGCTTTNCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: TATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86859772|gb|CI345426.1|CI345426
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|218478507|gb|FG954789.1|FG954789
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88541012|gb|CI469095.1|CI469095
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88269408|gb|CI380706.1|CI380706
EST:     AGCTGGTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: AGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86834911|gb|CI345995.1|CI345995
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88565581|gb|CI496298.1|CI496298
EST:     CCAGTGGAGGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: CCAGTGGA-GCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|58588665|gb|CF986973.1|CF986973
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86833840|gb|CI338211.1|CI338211
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88437750|gb|CI533707.1|CI533707
EST:     CCCATATATGATGTAGCTGGTATACTCACATCCATCCAG                         TCGGTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: CCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88220335|gb|CI219895.1|CI219895
EST:     ACCAGTGGAGCCCCATATATGACGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|33813642|gb|CF332708.1|CF332708
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88281319|gb|CI402715.1|CI402715
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86260384|gb|CI066257.1|CI066257
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88505474|gb|CI432980.1|CI432980
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|86415688|gb|CI029699.1|CI029699
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88471687|gb|CI408958.1|CI408958
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88561659|gb|CI492376.1|CI492376
EST:     ACCAGTGGAGCCCCATATATGATGTAGGTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|33656467|gb|CF279081.1|CF279081
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|8858097|gb|AU095415.1|AU095415
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88545525|gb|CI475091.1|CI475091
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88481652|gb|CI418923.1|CI418923
EST:     ACCAGTGGAGCCCCATATATGATTTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|29619931|gb|CB624943.1|CB624943
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88553955|gb|CI484100.1|CI484100
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88554375|gb|CI484549.1|CI484549
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|3767210|gb|AU031320.1|AU031320
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88295097|gb|CI523051.1|CI523051
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88554689|gb|CI484884.1|CI484884
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88254945|gb|CI353769.1|CI353769
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|8527972|gb|AU092787.1|AU092787
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
EST: gi|88241302|gb|CI241151.1|CI241151
EST:     ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAG                         TCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC
genomic: ACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 74 (upstream exon), 75 (downstream exon)
Score: 70

TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatg ... ttatttccagTCGCTGCTTTGCGATCCAAACCCAAATTCACCTGCCAACTCTGAAGCTGCCCGCCTATTCAGTGAGAACAAGCGGGAATACAACCGAAAAGTTCGTGAGA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTTATGCTGATGGGAGCATATGCTTAGATATACTACAAAACCAGTGGAGCCCCATATATGATGTAGCTGCTATACTCACATCCATCCAGgtagatgatgccttttttgggggtattagcatgtcatgatgtcctgtcatgtttgttgcaatattttgtatcatgtttataattcgtgcttctgattttg

- - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - -  GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGCT