Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGCGTGATCCAATTGAAAGGGTTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatcatatgtcaaatatgtttaatgtttaagtgatgtataatgacagtcgtgactagagatgcaatttcatttagtggtatattctctgtattattatgattcattaacttgttcttttgtctcag

Basic information

species Oryza sativa
transcript LOC_Os02g50620.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g50620.1 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM2G361693_T01 (Zea mays), 5'ss of exon 5
GAGCGTGATCCAATTGAAAGGGTTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc---------atatgtcaaa-tatgtttaatgtttaagtgatgtataatgacagtcgtgactagagatgcaatttc--atttagtggtatattc--tctgtattattatgattcattaacttgttcttttgtctcag
|| || |||||||||||||||||||| |||||| ||||| |||||||||| |||| |||||||||||||||||||    ||          |||  | | | ||| |  ||||| ||| ||| | |||| |  | |  | | ||| ||    ||||   |  || |  |   |||  |   ||||||  || || |   |||| || | ||  |||||
GAACGGGATCCAATTGAAAGGGTTAGAAAGTTGCTTTTGACTCATGACCTGGCAAATGCTGCTGAGCTCAAGgtacataattcttttggaaatacataagagtatataaaatgtataattgaagcataaag--aatgcttattagggaaattattttcaaaatattatttcgttcagttcatattatagtgtttaacatacttattatctt--ctcag

upper sequence: LOC_Os02g50620.1 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM2G140150_T01 (Zea mays), 5'ss of exon 5
GAGCGTGATCCAATTGAAAGGGTTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatcatatgtcaaatatgt----ttaatgtttaagtgatgtataatgacagtcgtgactagagatgcaatttcatttagtggtatattctctgtattattatgattcattaacttgttcttt--tgtctcag
|| || || ||||||||||||||||| |||||| |||||||||| ||| | ||||||||||||||||||||||||     |  | |   |||||       | ||||| |||  || | |||| |   ||   ||   | |||  | | |||     |  | | |||    |  |||| | ||   |||||  | |  ||    ||||||
GAACGGGACCCAATTGAAAGGGTTAGAAAGTTGCTTTTGGCTCACGACTTGGCAACTGCTGCTGAGCTCAAGgtacggagttcttttggaaatacacaagataaatgtataatcgaagcataaaggatgtttagaagggcgat-tattatcaaaatattatttcttcctgttcatattct-atcttttaacacgcttattatcttctcag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86484956|gb|CI127589.1|CI127589
EST:     AGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: AGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86485468|gb|CI128101.1|CI128101
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88958540|gb|CI096056.1|CI096056
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86478591|gb|CI121224.1|CI121224
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88964934|gb|CI097802.1|CI097802
EST:     GCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: GCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86526580|gb|CI166786.1|CI166786
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86435849|gb|CI107082.1|CI107082
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|27577814|gb|CB000509.1|CB000509
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86477775|gb|CI120408.1|CI120408
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88994049|gb|CI116013.1|CI116013
EST:     GGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: GGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89164431|gb|CI101519.1|CI101519
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89167121|gb|CI104407.1|CI104407
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87026831|gb|CI259484.1|CI259484
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGGAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88958344|gb|CI095863.1|CI095863
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88961010|gb|CI096413.1|CI096413
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|29678001|gb|CB674276.1|CB674276
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88251075|gb|CI349305.1|CI349305
EST:     TAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTGCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGC
genomic: TAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCT-CAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGC
EST: gi|88218288|gb|CI218137.1|CI218137
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86546257|gb|CI186463.1|CI186463
EST:     CTGAGCTCAAG                         GACATGGAGAAAGAAATCAGTAAAGAGGTCGATGATGCCATTGCGAAAGCA
genomic: CTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86489013|gb|CI131646.1|CI131646
EST:     AGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: AGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88259206|gb|CI363499.1|CI363499
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88830554|gb|CI077998.1|CI077998
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89161813|gb|CI102161.1|CI102161
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86880523|gb|CI321007.1|CI321007
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89164106|gb|CI101194.1|CI101194
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89164169|gb|CI101257.1|CI101257
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89174769|gb|CI110967.1|CI110967
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89185010|gb|CI049556.1|CI049556
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88844975|gb|CI022329.1|CI022329
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89166352|gb|CI103442.1|CI103442
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86414331|gb|CI068734.1|CI068734
EST:     GGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: GGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86254819|gb|CI061130.1|CI061130
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88989070|gb|CI042183.1|CI042183
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88974603|gb|CI022144.1|CI022144
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86435053|gb|CI106286.1|CI106286
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86490349|gb|CI132982.1|CI132982
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87024021|gb|CI252768.1|CI252768
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86437360|gb|CI119082.1|CI119082
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86489973|gb|CI132606.1|CI132606
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|16754624|gb|BM039003.1|BM039003
EST:     TAGGAAGTTGATTTTGGCTCATGACCTAGCATACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGATAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGC
genomic: TAGGAAGTTGATTTTGGCTCATGACCTAGCA-ACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGA-AATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGC
EST: gi|86490345|gb|CI132978.1|CI132978
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86490691|gb|CI133324.1|CI133324
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86480007|gb|CI122640.1|CI122640
EST:     TTAGGAAGCTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88836321|gb|CI078218.1|CI078218
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89179880|gb|CI044159.1|CI044159
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88361180|gb|CI646204.1|CI646204
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTACCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|58588659|gb|CF986967.1|CF986967
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATGAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86507858|gb|CI150491.1|CI150491
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87018512|gb|CI252266.1|CI252266
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87033864|gb|CI188488.1|CI188488
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87024655|gb|CI259370.1|CI259370
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88976948|gb|CI257644.1|CI257644
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88488162|gb|CI425433.1|CI425433
EST:     TTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89163721|gb|CI100611.1|CI100611
EST:     ATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: ATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89194117|gb|CI116554.1|CI116554
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|29615723|gb|CB620735.1|CB620735
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89188337|gb|CI115586.1|CI115586
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|29686016|gb|CB682291.1|CB682291
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89192652|gb|CI049950.1|CI049950
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|15855437|gb|BI808249.1|BI808249
EST:     TTAGGAA-TTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACACTGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCC-TTGCGAAAGC
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACA-TGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGC
EST: gi|29682671|gb|CB678946.1|CB678946
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86432449|gb|CI086060.1|CI086060
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86536206|gb|CI176412.1|CI176412
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89181695|gb|CI113201.1|CI113201
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86485020|gb|CI127653.1|CI127653
EST:     TTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89187724|gb|CI115170.1|CI115170
EST:     GTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: GTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87024605|gb|CI259320.1|CI259320
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|22304807|gb|BQ906029.1|BQ906029
EST:     GGCTCATGACCCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCN
genomic: GGCTCATGA-CCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88907269|gb|CI090063.1|CI090063
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|29637300|gb|CB642309.1|CB642309
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88832414|gb|CI019355.1|CI019355
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87034225|gb|CI188849.1|CI188849
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88974834|gb|CI023122.1|CI023122
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86546774|gb|CI186980.1|CI186980
EST:     AGGAAGTCGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: AGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|18386551|gb|BM419749.1|BM419749
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCCTTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86603875|gb|CI114649.1|CI114649
EST:     TGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGTAATCAGAAAAGAAGTCGATGATGCCATTTCGAAAGCA
genomic: TGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86487927|gb|CI130560.1|CI130560
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88238315|gb|CI238164.1|CI238164
EST:     TTAGGAAGTTGATTTTGGCTCATGACCAAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86842317|gb|CI335234.1|CI335234
EST:     GCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGGAAGCA
genomic: GCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86483401|gb|CI126034.1|CI126034
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGGGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88957005|gb|CI095055.1|CI095055
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88834488|gb|CI077771.1|CI077771
EST:     TTAGGAAGTTGATCTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|15855128|gb|BI807940.1|BI807940
EST:     GATTTT-GCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: GATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89163553|gb|CI100443.1|CI100443
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89193632|gb|CI116265.1|CI116265
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86412993|gb|CI067398.1|CI067398
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88199762|gb|CI199612.1|CI199612
EST:     CTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: CTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86482809|gb|CI125442.1|CI125442
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|29639554|gb|CB644563.1|CB644563
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|66915210|gb|CX102058.1|CX102058
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88828606|gb|CI073476.1|CI073476
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86544992|gb|CI185198.1|CI185198
EST:     TTAGGAATTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89194531|gb|CI116968.1|CI116968
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCT
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89174492|gb|CI110690.1|CI110690
EST:     AGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: AGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86434327|gb|CI094670.1|CI094670
EST:     AGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTGAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: AGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87024222|gb|CI256963.1|CI256963
EST:     ACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: ACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89165526|gb|CI102616.1|CI102616
EST:     CTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: CTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86433745|gb|CI094088.1|CI094088
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89169804|gb|CI110163.1|CI110163
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87026901|gb|CI259554.1|CI259554
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88243131|gb|CI244253.1|CI244253
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|86594895|gb|CI258149.1|CI258149
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGGAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|29689207|gb|CB685482.1|CB685482
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|396941607|gb|HO188264.1|HO188264
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88907809|gb|CI091207.1|CI091207
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCGACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88958415|gb|CI095933.1|CI095933
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87034875|gb|CI188678.1|CI188678
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|18386605|gb|BM419803.1|BM419803
EST:     AGGAA-TTGTATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCATAG                         GACATGGAGAATAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAG
genomic: AGGAAGTTG-ATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCA-AGgtatcatatc ... tttgtctcagGACATGGAGAA-AGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAG
EST: gi|88991066|gb|CI108453.1|CI108453
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|87028170|gb|CI111864.1|CI111864
EST:     GCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         AACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: GCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|89194322|gb|CI116759.1|CI116759
EST:     GCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: GCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
EST: gi|88244521|gb|CI243643.1|CI243643
EST:     TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAG                         GACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA
genomic: TTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 71 (upstream exon), 75 (downstream exon)
Score: 94

GAGCGTGATCCAATTGAAAGGGTTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatc ... tttgtctcagGACATGGAGAAAGAAATCAGAAAAGAAGTCGATGATGCCATTGCGAAAGCAAAG




<











<


<









Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GAGCGTGATCCAATTGAAAGGGTTAGGAAGTTGATTTTGGCTCATGACCTAGCAACTGCTGCTGAGCTCAAGgtatcatatcatatgtcaaatatgtttaatgtttaagtgatgtataatgacagtcgtgactagagatgcaatttcatttagtggtatattctctgtattattatgattcattaacttgttcttttgtctcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA