1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCAATGCAGCAGTTTCTAAAAATGTGAAGAACAAGGTTTTCTCCATCGATCTTGTTTCAGAGGACCCTTCAGTCATTGCCTGTGATATGGCTCATgtaagcatttaaccatatcttgtatggttgtacctctttggtgctttaacgtgttggcatgttgtttatgtgtgttagcataaatgaacaaagtgtttct...
species | Oryza sativa |
transcript | LOC_Os02g38060.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GATATGGCTCAT ACTCCATTGGAGTCATCCTCTGTAGATGTGGCAATTTTTTGTCTGTCTTTAEST: gi|86541932|gb|CI182138.1|CI182138
genomic: GATATGGCTCATgtaagcattt ... atttctgtagACTCCATTGGAGTCATCCTCTGTAGATGTGGCAATTTTTTGTCTGTCTTTA
EST: TCGATCTTGTTTCAGAGGACCCTTCAGTCATTGCCTGTGATATGGCTCAT ACTCCATTGGAGTCATCCTCTGTAGATGTGGCAATTTTTTGTCTGTCTTTA
genomic: TCGATCTTGTTTCAGAGGACCCTTCAGTCATTGCCTGTGATATGGCTCATgtaagcattt ... atttctgtagACTCCATTGGAGTCATCCTCTGTAGATGTGGCAATTTTTTGTCTGTCTTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAATGCAGCAGTTTCTAAAAATGTGAAGAACAAGGTTTTCTCCATCGATCTTGTTTCAGAGGACCCTTCAGTCATTGCCTGTGATATGGCTCATgtaagcatttaaccatatcttgtatggttgtacctctttggtgctttaacgtgttggcatgttgtttatgtgtgttagcataaatgaacaaagtgtttct
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