Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
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 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCTGTTGGCAACTGTGCTATGGAGGAGAAGCAGATCTTCCAAAATGTGCAGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatcatgtgttccttatagcatagatacaaaatttatctgccacttggacatcagcctagttattctgatgatttgacatgttatttgtatcatcgtgcag

Basic information

species Oryza sativa
transcript LOC_Os02g21660.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g21660.1 (Oryza sativa), 5'ss of exon 5
lower sequence: GRMZM2G023748_T02 (Zea mays), 5'ss of exon 5
TGCTGTTGGCAACTGTGCTATGGAGGAGAAGCAGATCTTCCAAAATGTGCAGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatcatgtgttccttatagcatagatacaaaatttatctgccacttggacatcagcctagttattctgatgatttgacatgttatttgtatcatcgtgcag
||||||||||||||| |  ||||| ||||||||||||||||| |||||||| ||||| || |||||||| || || || ||||| |||||||||||||| ||||||  || |    ||  ||||  ||  || |  |  |  |||   |  ||   |||  |   | ||      | || |    ||||    |             
TGCTGTTGGCAACTGCGGCATGGATGAGAAGCAGATCTTCCAGAATGTGCAAATGAGTGTCAACTTCCTCGTGTCGCTCTTGAAAAAGAATTGGCAGAATgtatgt--tcctcacatctgtataaaattaatgcttatgt--tctaaaatatgactatccactgggctaact--gtcatcttgtgtgtttgcag-------------

upper sequence: LOC_Os02g21660.1 (Oryza sativa), 5'ss of exon 5
lower sequence: AT5G22440.1 (Arabidopsis thaliana), 5'ss of exon 5
TGCTGTTGGCAACTGTGCTATGGAGGAGAAGCAGATCTTCCAAAATGTGCAGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatcatgtgttccttatagcatagata---caaaatttatctgccacttggacatcagcctagttattctgatgatttgacatgttatttgtatcatcgtgcag
|||||| || ||   | | |||||||||||||||||||| |||||||| |||||||| || |||||||| ||||| || |||||||| || ||||| || ||  || |  |     || | |     | |||    |   ||  || |  || |     |  | |  |||| |||   ||| |  |                        
TGCTGTCGGTAATCTTTCCATGGAGGAGAAGCAGATCTTTCAAAATGTTCAGATGAGTGTTAACTTCCTCGTTTCTCTCTTGAAGAAAAACTGGCAAAATgttagtaacaacaccctcttgaacttctcgatctttctccatacatttatcagt-atctaaaacctgagttgttcctttgactgcag-----------------------

upper sequence: LOC_Os02g21660.1 (Oryza sativa), 5'ss of exon 5
lower sequence: AT2G27530.1 (Arabidopsis thaliana), 5'ss of exon 5
TGCTGTTGGCAACTGTGCTATGGAGGAGAAGCAGATCTTCCAAAATGTGCAGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatcatgtgttccttatagcatagatacaaaatttatctgccacttggacatcagcctagttattctgatgatttgacatgttatttgtatcatcgtgcag
||||||||| |||  | | ||||| ||||||||| ||||||| |||||||||||||| || |||||||| || || || ||||||||||||||||| |||||||  |||  ||| ||  |  ||  || | |    ||||| | |      |  |  ||   |||||  | || ||  |||||       |||| ||| |  |||||
TGCTGTTGGTAACCTTTCCATGGAAGAGAAGCAGCTCTTCCAGAATGTGCAGATGAGTGTTAACTTCCTCGTCTCGCTCTTGAAGAAGAATTGGCAAAACgtat--gattctgttttgttcctatgattg-tgtctaatttcttt-----ctaaatctctctctagt-gtactaat--tttga-------tttggatcttgatgcag

upper sequence: LOC_Os02g21660.1 (Oryza sativa), 5'ss of exon 5
lower sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 3
TGCTGTTGGCAACTGTGCTATGGAGGAGAAGCAGATCTTCCAAAATGTGCAGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatcatgt-gttccttatagcatagatacaaaatttatctgccacttggacatcagcctagttattc--tgatgatttga---catgttatttgtatcatcgtgcag-----------------------------
|||  |||| || ||||  ||||||||||||||||||||||||||    |||||| | || ||||||||||| |||||  |||||||||| |||||||| ||| |  |  |  |   |  ||  | ||||  | | |  | |  ||   | | | |        || | ||||  |  | | | ||      ||   |  |  ||||    ||                             
TGCCATTGGAAATTGTGACATGGAGGAGAAGCAGATCTTCCAAAACACTCAGATGGGTGTCAACTTCCTTGTATCCCTGCTGAAGAAGAACTGGCAGAATgtaagcaacaaactcaatagtttcatcatatttccgacctgttccttttattcgtattagtttgtattaattcggtatttactcgagcttgcgtcgctgatcacatctctaagtattctgttcatactttttcttgtggcag

upper sequence: LOC_Os02g21660.1 (Oryza sativa), 5'ss of exon 5
lower sequence: EFJ31249 (Selaginella moellendorffii), 5'ss of exon 3
TGCTGTTGGCAACTGTGCTATGGAGGAGAAGCAGATCTTCCAAAATGTGCAGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgat-----catgtgttccttatagcatagatacaaaatttatctgccacttggacatcagcctagttattctgatgatttgacatgttatttgtatcatcgtgcag
 || || ||||||   |  ||||||||||||||| ||||||| || || ||| | ||||| |||||||| || || ||  | |||||||| |||||||||||| ||  |     |   | |  ||| |  | | | |   || ||    ||   |  |                                                      
AGCAGTGGGCAACATCGAGATGGAGGAGAAGCAGGTCTTCCAGAACGTTCAGCTCAGCGTTAACTTCCTCGTCTCGCTGCTCAAGAAGAACTGGCAGAACgtaagtagtaggagcgcttctctcttttctcgtggctt--aacttcgattgtttccag------------------------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86533791|gb|CI173997.1|CI173997
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88971889|gb|CI390474.1|CI390474
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88409365|gb|CI559463.1|CI559463
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|86509842|gb|CI152475.1|CI152475
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88508655|gb|CI436161.1|CI436161
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88322305|gb|CI540273.1|CI540273
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88835009|gb|CI370312.1|CI370312
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|33680146|gb|CF308385.1|CF308385
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88838766|gb|CI376304.1|CI376304
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88482383|gb|CI419654.1|CI419654
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88846791|gb|CI373559.1|CI373559
EST:     AGATGAGCCTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88280851|gb|CI400370.1|CI400370
EST:     AGATGAGCGTGAACTTCCTTTTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|25806934|gb|CA762895.1|CA762895
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88958874|gb|CI381677.1|CI381677
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88254853|gb|CI351481.1|CI351481
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88449126|gb|CI560587.1|CI560587
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88262390|gb|CI366164.1|CI366164
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|89168798|gb|CI020879.1|CI020879
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88283263|gb|CI404709.1|CI404709
EST:     AGATGAGCGTNAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|89177619|gb|CI390798.1|CI390798
EST:     AGATGAGAGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88254154|gb|CI352780.1|CI352780
EST:     AGATGAGCCTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88277369|gb|CI398171.1|CI398171
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88471989|gb|CI409260.1|CI409260
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|15849992|gb|BI798268.1|BI798268
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGCCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCCATGGGAAAGGTGTACCGAGTGTT
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCA-CCATGGGAAAGGTGTACCGAGTGTT
EST: gi|86893846|gb|CI314878.1|CI314878
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|33807700|gb|CF329742.1|CF329742
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCAGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88481006|gb|CI418277.1|CI418277
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|11610305|gb|AU165981.1|AU165981
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|89169053|gb|CI020593.1|CI020593
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88265562|gb|CI376464.1|CI376464
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88469283|gb|CI406554.1|CI406554
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88470568|gb|CI407839.1|CI407839
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88382526|gb|CI535734.1|CI535734
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88958873|gb|CI381676.1|CI381676
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88282337|gb|CI403733.1|CI403733
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88486598|gb|CI423869.1|CI423869
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|86509117|gb|CI151750.1|CI151750
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGTTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88304440|gb|CI518096.1|CI518096
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88443945|gb|CI552490.1|CI552490
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88289104|gb|CI520434.1|CI520434
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|15851161|gb|BI799437.1|BI799437
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCCGAGTGTT
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACC-GAGTGTT
EST: gi|89196375|gb|CI398961.1|CI398961
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88978809|gb|CI385150.1|CI385150
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|87012420|gb|CI280324.1|CI280324
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88375147|gb|CI523412.1|CI523412
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88511613|gb|CI439119.1|CI439119
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|8527829|gb|AU092644.1|AU092644
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88420083|gb|CI513764.1|CI513764
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88277371|gb|CI398173.1|CI398173
EST:     AGATGAGCTTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         CTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88977431|gb|CI025167.1|CI025167
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88481953|gb|CI419224.1|CI419224
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88848729|gb|CI087251.1|CI087251
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88408283|gb|CI551412.1|CI551412
EST:     TTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: TTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88486050|gb|CI423321.1|CI423321
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|86596699|gb|CI286612.1|CI286612
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATCGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88545478|gb|CI475041.1|CI475041
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88469255|gb|CI406526.1|CI406526
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88543238|gb|CI473228.1|CI473228
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|33686984|gb|CF315223.1|CF315223
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88296902|gb|CI542614.1|CI542614
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|86879778|gb|CI339917.1|CI339917
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88842852|gb|CI371752.1|CI371752
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|89177478|gb|CI390657.1|CI390657
EST:     AGATGAGAGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|27334454|gb|CA882905.1|CA882905
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGT
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGT
EST: gi|88374485|gb|CI515969.1|CI515969
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|55410611|gb|CV722987.1|CV722987
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88960371|gb|CI382249.1|CI382249
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         -TTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88280737|gb|CI401935.1|CI401935
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGCCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88262124|gb|CI365700.1|CI365700
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88475347|gb|CI412618.1|CI412618
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88502604|gb|CI430110.1|CI430110
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|8527787|gb|AU092602.1|AU092602
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88466813|gb|CI542390.1|CI542390
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88996602|gb|CI389268.1|CI389268
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTTAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88260568|gb|CI362861.1|CI362861
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|89172839|gb|CI022718.1|CI022718
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88513252|gb|CI440758.1|CI440758
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88488668|gb|CI425939.1|CI425939
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|218480694|gb|FG957034.1|FG957034
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCCATGGGAAAG
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACC-ATGGGAAAG
EST: gi|8527691|gb|AU092506.1|AU092506
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|27921137|gb|CB096945.1|CB096945
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88455538|gb|CI521758.1|CI521758
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88282929|gb|CI402129.1|CI402129
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGGAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|88523180|gb|CI450984.1|CI450984
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|33681948|gb|CF310187.1|CF310187
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|8335305|gb|BE040289.1|BE040289
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
EST: gi|218478412|gb|FG955762.1|FG955762
EST:     AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAAC                         GTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC
genomic: AGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 72 (upstream exon), 72 (downstream exon)
Score: 169

TGCTGTTGGCAACTGTGCTATGGAGGAGAAGCAGATCTTCCAAAATGTGCAGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatc ... catcgtgcagGTTAGGTGCTTGTACCTGAAGAGCACCATGGGAAAGGTGTACCGAGTGTTCTAAGTTATTTTCTTTAGGCTTCTAGATGTTTTGGAGACTAAGCTACTTG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGCTGTTGGCAACTGTGCTATGGAGGAGAAGCAGATCTTCCAAAATGTGCAGATGAGCGTGAACTTCCTTGTTTCCCTTTTGAAGAAGAATTGGCAGAACgtatgtgatcatgtgttccttatagcatagatacaaaatttatctgccacttggacatcagcctagttattctgatgatttgacatgttatttgtatcatcgtgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG