1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCTCTTGCAACGCCTTCATGGCACTAGTGATGCGGCAGGAAGTAAAAAGATGCCTACTGGGAACACCTCACAGAACATGACTAACAGCAGACACTTGGAGgtacttattcaagattccactgtggtgtaatgaatttaatttaagatgcttccttccaaattaatattaatacttacagtgagaaagcagcagtcataac...
species | Oryza sativa |
transcript | LOC_Os09g21780.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGCCTACTGGGAACACCTCACAGAACATGACTAACAGCAGACACTTGGAG CTCGATGTTTGGGCGAAGGAAAGAGAAGTTGCTGGGTTAAAGGCAAGCTTGEST: gi|58665932|gb|CK054618.1|CK054618
genomic: TGCCTACTGGGAACACCTCACAGAACATGACTAACAGCAGACACTTGGAGgtacttattc ... attattttagCTCGATGTTTGGGCGAAGGAAAGAGAAGTTGCTGGGTTAAAGGCAAGCTTG
EST: TGCCTACTGGGAACACCTCACAGAACATGACTAACAGCAGACACTTGGAG CTCGATGTTTGGGCGAAGGAAAGAGAAGTTGCTGGGTTAAAGGCAAGCTTG
genomic: TGCCTACTGGGAACACCTCACAGAACATGACTAACAGCAGACACTTGGAGgtacttattc ... attattttagCTCGATGTTTGGGCGAAGGAAAGAGAAGTTGCTGGGTTAAAGGCAAGCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTCTTGCAACGCCTTCATGGCACTAGTGATGCGGCAGGAAGTAAAAAGATGCCTACTGGGAACACCTCACAGAACATGACTAACAGCAGACACTTGGAGgtacttattcaagattccactgtggtgtaatgaatttaatttaagatgcttccttccaaattaatattaatacttacagtgagaaagcagcagtcataac
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