1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttccccaaatcatcaacttgtactgcttcagtcagactccagtgttaaacaatttactcatttagtgttctcagtgactgataatggatcctgttaatgtgttttaccttttctctaaagctaatcag
species | Oryza sativa |
transcript | LOC_Os05g03480.4 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29665694|gb|CB661969.1|CB661969
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|58675201|gb|CK063888.1|CK063888
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|58675201|gb|CK063888.1|CK063888
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29661037|gb|CB657312.1|CB657312
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29661037|gb|CB657312.1|CB657312
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29678947|gb|CB675222.1|CB675222
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29678947|gb|CB675222.1|CB675222
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29637530|gb|CB642539.1|CB642539
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29637530|gb|CB642539.1|CB642539
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29661524|gb|CB657799.1|CB657799
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29661524|gb|CB657799.1|CB657799
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29668355|gb|CB664630.1|CB664630
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG TGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTEST: gi|29642007|gb|CB647014.1|CB647014
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACT
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29642007|gb|CB647014.1|CB647014
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|58588211|gb|CF986519.1|CF986519
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGCTAATCAGEST: gi|29664861|gb|CB661136.1|CB661136
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTA-C----C-AA--AGgtgcttcccc ... agc
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG TGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTEST: gi|29661039|gb|CB657314.1|CB657314
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACT
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29661039|gb|CB657314.1|CB657314
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29669233|gb|CB665508.1|CB665508
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29669233|gb|CB665508.1|CB665508
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29662792|gb|CB659067.1|CB659067
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG TGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTEST: gi|29663795|gb|CB660070.1|CB660070
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACT
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29663795|gb|CB660070.1|CB660070
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29637231|gb|CB642240.1|CB642240
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29637231|gb|CB642240.1|CB642240
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29642660|gb|CB647667.1|CB647667
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG TGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTEST: gi|29663209|gb|CB659484.1|CB659484
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACT
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGCTAATCAGEST: gi|29642658|gb|CB647665.1|CB647665
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTA-C----C-AA--AGgtgcttcccc ... agc
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG TGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTEST: gi|29671620|gb|CB667895.1|CB667895
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACT
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29671620|gb|CB667895.1|CB667895
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29670746|gb|CB667021.1|CB667021
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29670746|gb|CB667021.1|CB667021
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29664640|gb|CB660915.1|CB660915
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29664640|gb|CB660915.1|CB660915
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|58595349|gb|CF993657.1|CF993657
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGCTAATCAGEST: gi|58655315|gb|CK043995.1|CK043995
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTA-C----C-AA--AGgtgcttcccc ... agc
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|58655315|gb|CK043995.1|CK043995
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29659705|gb|CB655980.1|CB655980
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG TGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTEST: gi|29681462|gb|CB677737.1|CB677737
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACT
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29681462|gb|CB677737.1|CB677737
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|58666277|gb|CK054963.1|CK054963
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|58666277|gb|CK054963.1|CK054963
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29674356|gb|CB670631.1|CB670631
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGCTAATCAGEST: gi|29682069|gb|CB678344.1|CB678344
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTA-C----C-AA--AGgtgcttcccc ... agc
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29682069|gb|CB678344.1|CB678344
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29666865|gb|CB663140.1|CB663140
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29666865|gb|CB663140.1|CB663140
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29623029|gb|CB628040.1|CB628040
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29623029|gb|CB628040.1|CB628040
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29680931|gb|CB677206.1|CB677206
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29680931|gb|CB677206.1|CB677206
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29657680|gb|CB653955.1|CB653955
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29657680|gb|CB653955.1|CB653955
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29664203|gb|CB660478.1|CB660478
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29664203|gb|CB660478.1|CB660478
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29674433|gb|CB670708.1|CB670708
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCCAGTACTTACCAGAG TGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTEST: gi|29661262|gb|CB657537.1|CB657537
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACT
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29661262|gb|CB657537.1|CB657537
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29614820|gb|CB619833.1|CB619833
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29614820|gb|CB619833.1|CB619833
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29643545|gb|CB648552.1|CB648552
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29643545|gb|CB648552.1|CB648552
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|58689911|gb|CK078598.1|CK078598
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|58689911|gb|CK078598.1|CK078598
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29658881|gb|CB655156.1|CB655156
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29658881|gb|CB655156.1|CB655156
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29657355|gb|CB653630.1|CB653630
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29657355|gb|CB653630.1|CB653630
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|33683556|gb|CF311795.1|CF311795
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: CGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGCTAATCAGEST: gi|29675356|gb|CB671631.1|CB671631
genomic: CGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTA-C----C-AA--AGgtgcttcccc ... agc
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29675356|gb|CB671631.1|CB671631
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29672429|gb|CB668704.1|CB668704
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCGAGTACTTACCAAAG CEST: gi|29672429|gb|CB668704.1|CB668704
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCGAGTACTTACCAAAG CEST: gi|29664256|gb|CB660531.1|CB660531
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29664256|gb|CB660531.1|CB660531
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29661229|gb|CB657504.1|CB657504
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29661229|gb|CB657504.1|CB657504
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29641738|gb|CB646745.1|CB646745
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29641738|gb|CB646745.1|CB646745
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29658317|gb|CB654592.1|CB654592
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29658317|gb|CB654592.1|CB654592
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29668395|gb|CB664670.1|CB664670
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG TGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTEST: gi|25800055|gb|CA756016.1|CA756016
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACT
EST: CGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCANAGCTNATCAG TGGGGAGCATGTGGGGGCATTGGCGAEST: gi|29680249|gb|CB676524.1|CB676524
genomic: CGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCA-A----A---Ggtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGA
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29680249|gb|CB676524.1|CB676524
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29637190|gb|CB642199.1|CB642199
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29637190|gb|CB642199.1|CB642199
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|33654177|gb|CF276791.1|CF276791
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|33654177|gb|CF276791.1|CF276791
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29680494|gb|CB676769.1|CB676769
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29680494|gb|CB676769.1|CB676769
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29641375|gb|CB646382.1|CB646382
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG TGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTEST: gi|29661171|gb|CB657446.1|CB657446
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcagTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACT
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG CEST: gi|29661171|gb|CB657446.1|CB657446
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
EST: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAG C
genomic: GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttcccc ... agctaatcag-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGgtgcttccccaaatcatcaacttgtactgcttcagtcagactccagtgttaaacaatttactcatttagtgttctcagtgactgataatggatcctgttaatgtgttttaccttttctctaaagctaatcag
- - - - - - - - - - - - AGCTCA