1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AGGCTCTGGAGTGCTTGCATTTTGCCTAAACTTCTCCATTTTCTACGTGATCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccatttggcctatgctttgttcttttcatatattctgctcgatcatttcttagaactgatcattgcgctgcag
species | Oryza sativa |
transcript | LOC_Os04g59550.2 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGT- -T-GCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88247068|gb|CI246917.1|CI246917
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88847767|gb|CI018458.1|CI018458
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|33688357|gb|CF316596.1|CF316596
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88833625|gb|CI077106.1|CI077106
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: ATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATGGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|87026811|gb|CI259464.1|CI259464
genomic: ATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86503733|gb|CI146366.1|CI146366
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCCGGAACCCTATCTCEST: gi|86255766|gb|CI066829.1|CI066829
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTT-CCGGAACCCTATCTC
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88218577|gb|CI218426.1|CI218426
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|29616654|gb|CB621666.1|CB621666
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGT- -T-GCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86874424|gb|CI316790.1|CI316790
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: ACCTTCAATGTTGCT-GCAACCTG-AA--A G-TGCTGTTGCTGTATTGGTGTCAT-GTTGATCTTCC-GAACCCTATCTCTEST: gi|218492784|gb|FG960986.1|FG960986
genomic: ACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGT- -T-GCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|218497812|gb|FG965091.1|FG965091
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGT- -T-GCTGTTGCTGTATGGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86500550|gb|CI143183.1|CI143183
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|38476272|gb|CF960405.1|CF960405
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGT- -T-GCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|87024709|gb|CI259424.1|CI259424
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGT- -T-GCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88848848|gb|CI087370.1|CI087370
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATNGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88516692|gb|CI444346.1|CI444346
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88218401|gb|CI218250.1|CI218250
genomic: TCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88996515|gb|CI260019.1|CI260019
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86413586|gb|CI019171.1|CI019171
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|89180075|gb|CI044354.1|CI044354
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86412562|gb|CI066967.1|CI066967
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|58608598|gb|CK036631.1|CK036631
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATGCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86593965|gb|CI260194.1|CI260194
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88975965|gb|CI024216.1|CI024216
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88455420|gb|CI519441.1|CI519441
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGGTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88513990|gb|CI441496.1|CI441496
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88837594|gb|CI078954.1|CI078954
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88834668|gb|CI077951.1|CI077951
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: GCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTTTEST: gi|86413489|gb|CI067894.1|CI067894
genomic: GCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88983032|gb|CI250636.1|CI250636
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86535753|gb|CI175959.1|CI175959
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATGCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88481468|gb|CI418739.1|CI418739
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88829015|gb|CI073885.1|CI073885
genomic: TGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: AATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATGGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88829067|gb|CI073937.1|CI073937
genomic: AATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: CTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86603288|gb|CI112048.1|CI112048
genomic: CTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: ATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|84117662|gb|CD151429.1|CD151429
genomic: ATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGT- -T-GCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86418912|gb|CI053713.1|CI053713
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88992423|gb|CI035561.1|CI035561
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: CTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|87008234|gb|CI299202.1|CI299202
genomic: CTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|33690588|gb|CF318827.1|CF318827
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGACATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88289762|gb|CI525094.1|CI525094
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86428727|gb|CI075408.1|CI075408
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGT- G--GCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88835713|gb|CI370818.1|CI370818
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88217499|gb|CI217348.1|CI217348
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88264374|gb|CI368148.1|CI368148
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|89173863|gb|CI041756.1|CI041756
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: GCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86522157|gb|CI162363.1|CI162363
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTA GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88992389|gb|CI035527.1|CI035527
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88452271|gb|CI555348.1|CI555348
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88997115|gb|CI389781.1|CI389781
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|218485011|gb|FG955777.1|FG955777
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAGTGTTGCTGGCAACCTGAAAGT- -T-GCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|87015255|gb|CI275445.1|CI275445
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|29660579|gb|CB656854.1|CB656854
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: CCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAANA--A GT-GCTGTTGCTGTATTGGTGTCATGGTTGATCTTEST: gi|29660580|gb|CB656855.1|CB656855
genomic: CCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAA-AGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|88907523|gb|CI090317.1|CI090317
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCTEST: gi|86496461|gb|CI139094.1|CI139094
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
EST: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTG-AA--A GTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
genomic: TCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccattt ... tgcgctgcagGTTGCTGTTGCTGTATTGGTGTCATGGTTGATCTTCCGGAACCCTATCTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGCTCTGGAGTGCTTGCATTTTGCCTAAACTTCTCCATTTTCTACGTGATCCATTCAACCACTGCAGTGACCTTCAATGTTGCTGGCAACCTGAAAGTAgcaaccatttggcctatgctttgttcttttcatatattctgctcgatcatttcttagaactgatcattgcgctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG