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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTAGCTGCCTCAAATTGGACTGGTGAAGGCTCTTTCGTTTTTACATCAAGTACTGCTCTGTACGATTGTAGTGACAACGAATTGTGCAATGAGgtatccccacaagcctgcagattgtagctgtgaagtcttccatacttttctttttggctcttttcatttatagaagttctagtgacattaaaaaaaaaca...

Basic information

species Oryza sativa
transcript 13113.m00225
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: 13113.m00225 (Oryza sativa), 5'ss of exon 4
lower sequence: GRMZM2G017853_T01 (Zea mays), 5'ss of exon 4
AGTAGCTGCCTCAAATTGGACTGGTGAAGGCTCTTTCGTTTTTACATCAAGTACTGCTCTGTACGATTGTAGTGACAACGAATTGTGCAATGAGgtatccccacaagcctgcagattgtagctgtgaagtct-tccatacttttctttttggctcttttcatttatagaagttctagtgacattaaaaaaaaaca
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ATTGGCAGCATCAAATTGGACTGGTGAAGGATCTTTCCTGTTTACATCAAGTACAGCTCTGTATGATTGCAGTGACAACAGCATGTGCAACGAGgta-ctagagaaacacttattctgcagggattatatttgtctccactattttatctgtctcttttgggtgggtacaattgggaagattttaaaagtaacca