1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTGTTGCGTATGTTTCCCCCACTGCGCTTGGTACCACCGCAACAACATGCCTTCCTTTCTTGCTTGCTTCCACTGTTTTCGGTTACATCCTTGGTTCCCGgtactactccattttatatttactctctctttattcttgactttaaacataaccttttgttcattaacctcatctcaaaatttagtgcaaatatatgagt...
species | Oryza sativa |
transcript | LOC_Os10g42780.6 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTTCCTTTCTTGCTTGCTTCCACTGTTTTCGGTTACATCCTTGGTTCCCG GTTACCATCTGGTGTCAAGAAAGTGCTACACCCAATCATCTGTTGTGCACTEST: gi|29660093|gb|CB656368.1|CB656368
genomic: CTTCCTTTCTTGCTTGCTTCCACTGTTTTCGGTTACATCCTTGGTTCCCGgtactactcc ... attctcacagGTTACCATCTGGTGTCAAGAAAGTGCTACACCCAATCATCTGTTGTGCACT
EST: CTTCCTTTCTTGCTTGCTTCCACTGTTTTCGGTTACATCCTTGGTTCCCG GTTACCATCTGGTGTCAAGAAAGTGCTACACCCAATCATCTGTTGTGCACT
genomic: CTTCCTTTCTTGCTTGCTTCCACTGTTTTCGGTTACATCCTTGGTTCCCGgtactactcc ... attctcacagGTTACCATCTGGTGTCAAGAAAGTGCTACACCCAATCATCTGTTGTGCACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTTGCGTATGTTTCCCCCACTGCGCTTGGTACCACCGCAACAACATGCCTTCCTTTCTTGCTTGCTTCCACTGTTTTCGGTTACATCCTTGGTTCCCGgtactactccattttatatttactctctctttattcttgactttaaacataaccttttgttcattaacctcatctcaaaatttagtgcaaatatatgagt
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