1 5' 3' | 2 5' 3' | 3 5' 3' |
TGAGACCTGCTGAGTACAAGAGGTCCAGATTGTCAAGGAATCGCAGGACCGTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatccaaacacattacatgctcctttcttgcgatcagttggtgaaccaatctatctgcacctcgcag
species | Oryza sativa |
transcript | LOC_Os08g06040.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88522125|gb|CI449859.1|CI449859
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88471627|gb|CI408898.1|CI408898
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88515539|gb|CI443193.1|CI443193
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTTTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88992083|gb|CI035221.1|CI035221
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88527054|gb|CI455167.1|CI455167
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88392096|gb|CI683927.1|CI683927
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|10794904|gb|AU108870.1|AU108870
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGT-CTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|86253316|gb|CI058241.1|CI058241
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88976264|gb|CI024481.1|CI024481
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|287280|gb|D16082.1|D16082
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88271756|gb|CI387809.1|CI387809
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|30228525|gb|CB966416.1|CB966416
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|86418011|gb|CI032220.1|CI032220
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|15847674|gb|BI795838.1|BI795838
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88487268|gb|CI424539.1|CI424539
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88517374|gb|CI445028.1|CI445028
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88374604|gb|CI518471.1|CI518471
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88384323|gb|CI551249.1|CI551249
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|163920878|gb|EG710089.1|EG710089
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCTGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88490488|gb|CI427760.1|CI427760
genomic: GTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88506594|gb|CI434100.1|CI434100
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|58674240|gb|CK062926.1|CK062926
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTATGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATTCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88419273|gb|CI513694.1|CI513694
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88285985|gb|CI515109.1|CI515109
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: CTGGTACTCCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88320229|gb|CI520773.1|CI520773
genomic: CTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTNTGAAGAAGGTGTTEST: gi|88409145|gb|CI556853.1|CI556853
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88427913|gb|CI554421.1|CI554421
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|23513092|gb|BU672971.1|BU672971
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|3090473|gb|C93460.1|C93460
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCNGGCTTTTTTGGTCGAGGAGCAGANGATTGTGAAGAAGGTGTTEST: gi|88381733|gb|CI682405.1|CI682405
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88212849|gb|CI210700.1|CI210700
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|427534|gb|D23601.1|D23601
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTNGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTEST: gi|86423139|gb|CI060712.1|CI060712
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88511547|gb|CI439053.1|CI439053
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: NTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88482368|gb|CI419639.1|CI419639
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: TGAACCGTCCTTACGGT-GTAGTCCTGTCTGGTACTACAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGANGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88962927|gb|CI025413.1|CI025413
genomic: TGAACCGTCCTTACGGTGGT-GTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGC-TTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|11565085|gb|AU165721.1|AU165721
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|86253281|gb|CI058206.1|CI058206
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88208339|gb|CI208188.1|CI208188
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|86416360|gb|CI030371.1|CI030371
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCNNNNNNNGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTEST: gi|23514705|gb|BU673770.1|BU673770
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGC-TTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|89170363|gb|CI039640.1|CI039640
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88345129|gb|CI628383.1|CI628383
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCNNNNNNNGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTEST: gi|88544067|gb|CI474131.1|CI474131
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTT-GGTCGAGGAGCAGAAGATTGTGAAGAAGGTGT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88409322|gb|CI559420.1|CI559420
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|89198979|gb|CI253053.1|CI253053
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|86531179|gb|CI171385.1|CI171385
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88263329|gb|CI367103.1|CI367103
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|4879891|gb|AU064190.1|AU064190
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGGCTTTTTTNGGGTCGAAGGAGCAGAAAGATTGTGAAGAAEST: gi|9788908|gb|BE530918.1|BE530918
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGG-CTTTTTT-GG-TCGA-GGAGCAGAA-GATTGTGAAGAA
EST: GTGAACCGTCCTTATGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATTCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88484385|gb|CI421656.1|CI421656
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88520592|gb|CI448246.1|CI448246
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|30227232|gb|CB965124.1|CB965124
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88381121|gb|CI525891.1|CI525891
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88413236|gb|CI523797.1|CI523797
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|88413946|gb|CI530918.1|CI530918
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTTEST: gi|4879856|gb|AU064155.1|AU064155
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
EST: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAG GATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
genomic: GTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatc ... cacctcgcagGATCATCCGGGCTTTTTTGGTCGAGGAGCAGAAGATTGTGAAGAAGGTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGACCTGCTGAGTACAAGAGGTCCAGATTGTCAAGGAATCGCAGGACCGTGAACCGTCCTTACGGTGGTGTCCTGTCTGGTACTGCAGTCAGAGAGAGgtaaaccatccaaacacattacatgctcctttcttgcgatcagttggtgaaccaatctatctgcacctcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG