1 5' 3' | 2 5' 3' | 3 5' 3' |
GGGATTGAAGAAGGAATTCAGCTACAACAAGATCCTCAAAGATCTCAAGAAAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaataaccgaaatttgtggtgcctgatctttacgtttttctatctttctgagctagtttttctgatcaatgcttcactctgtag
species | Oryza sativa |
transcript | LOC_Os07g34589.4 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATEST: gi|10931460|gb|AU161734.1|AU161734
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGAT
EST: AAGAGTTTTGCTGNAATGGTACTGTTGTCCAGGACCCAGAGTTTG-CCAG GTCATT-AACTTCAAGGTGATCAGAGGGAAAACGTNTCAA-TTTTCTTGTTEST: gi|33822543|gb|CF337077.1|CF337077
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTEST: gi|88342318|gb|CI658973.1|CI658973
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCEST: gi|33655791|gb|CF278405.1|CF278405
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTC
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGGTGATCAGAGGAAAAACGTATCAAEST: gi|33657184|gb|CF279798.1|CF279798
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGG-TGATCAGAGGAAAAACGTATCAA
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGGTGATCAGAGGAAAAACGTATCAAEST: gi|55433439|gb|CV729824.1|CV729824
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGG-TGATCAGAGGAAAAACGTATCAA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|13807073|gb|AU181800.1|AU181800
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGEST: gi|218478169|gb|FG952614.1|FG952614
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTG
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAAAGCTTGGCCAC GTCATTCAACTTCAGGGTGATCAGAGGAAGAACGTAT-AAGATTTTCTTGTEST: gi|33654864|gb|CF277478.1|CF277478
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAA-ATTTTCTTGT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTEST: gi|55434624|gb|CV730436.1|CV730436
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|5005525|gb|AU070290.1|AU070290
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|55432349|gb|CV729195.1|CV729195
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|5003992|gb|AU069141.1|AU069141
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|10931521|gb|AU161795.1|AU161795
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGNAAA-CGTATCAAATTT-CTTGTTEST: gi|88574402|gb|CI666171.1|CI666171
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|5004323|gb|AU069472.1|AU069472
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGNTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTT-CTTGTEST: gi|33658926|gb|CF281539.1|CF281539
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|88385731|gb|CI566593.1|CI566593
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTC-AGGACC-AGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|88578450|gb|CI687383.1|CI687383
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTEST: gi|10931191|gb|AU161465.1|AU161465
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGNCCCAGAGCTTGGCCAG GT-ATTTCAATTTAAGGGTGATCAGAGGAAAAAGGT-TCAAAEST: gi|88371934|gb|CI681449.1|CI681449
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATT-CAACTTCAGGGTGATCAGAGGAAAAACGTATCAAA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTAEST: gi|33658505|gb|CF281118.1|CF281118
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTA
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGGTGATCAGAGGAAAAACGTATCAEST: gi|33659008|gb|CF281621.1|CF281621
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGG-TGATCAGAGGAAAAACGTATCA
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGGTGATCAGAGGAAAAACGTATCAAEST: gi|33659352|gb|CF281965.1|CF281965
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGG-TGATCAGAGGAAAAACGTATCAA
EST: CAGAGTTTCGCTGCAATGGTACTGTTGTCCATGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|10930902|gb|AU161176.1|AU161176
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCEST: gi|5004268|gb|AU069417.1|AU069417
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATC
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTEST: gi|55438568|gb|CV732581.1|CV732581
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|218501665|gb|FG956181.1|FG956181
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAGAACGTATCAAATTTTCTTGTTEST: gi|5003619|gb|AU068768.1|AU068768
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AGAGTTTTGCTGCAATGGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTAAT-CAACTTCNGGGTGATCAGAGGEST: gi|55439860|gb|CV733241.1|CV733241
genomic: AGAGTTTTGCTGCAATGG-TACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGG
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|88453591|gb|CI681318.1|CI681318
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCEST: gi|88296327|gb|CI669103.1|CI669103
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATC
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAEST: gi|5004345|gb|AU069494.1|AU069494
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGEST: gi|88325376|gb|CI675174.1|CI675174
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAG
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAEST: gi|218489533|gb|FG952479.1|FG952479
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAGAACGTATCAAATTTTCTTGTTEST: gi|88397535|gb|CI684460.1|CI684460
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTEST: gi|33655482|gb|CF278096.1|CF278096
genomic: AGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCC-AGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATEST: gi|88392264|gb|CI684109.1|CI684109
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGAT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCEST: gi|55432278|gb|CV729159.1|CV729159
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTC
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCANATTTTCTTGTTEST: gi|33659492|gb|CF282105.1|CF282105
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGGTGATCAGAGGAAAAACGTATEST: gi|33659025|gb|CF281638.1|CF281638
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGG-TGATCAGAGGAAAAACGTAT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCEST: gi|33659283|gb|CF281896.1|CF281896
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATC
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|218486401|gb|FG954654.1|FG954654
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAGAACGTATCAAATTTTCTTGTTEST: gi|88314749|gb|CI608208.1|CI608208
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTEST: gi|55410876|gb|CV723252.1|CV723252
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|218482459|gb|FG952468.1|FG952468
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAGAACGTATCAAATTTTCTTGTTEST: gi|88425616|gb|CI569340.1|CI569340
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGAT-AGAGGAAAA-CGTCTCAAATTTT-TTGT-EST: gi|55440331|gb|CV733475.1|CV733475
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|88575978|gb|CI670123.1|CI670123
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|33679542|gb|CF307781.1|CF307781
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|218486314|gb|FG947937.1|FG947937
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCEST: gi|38565600|gb|CK085053.1|CK085053
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATC
EST: AAGAGTTTTGCTGCAATGGTATTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAGAACGTATCAAATTTTCTTGTTEST: gi|33658019|gb|CF280633.1|CF280633
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCEST: gi|33659753|gb|CF282366.1|CF282366
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATC
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTAATCAGAGGAAAAACGTATCAAEST: gi|5004388|gb|AU069537.1|AU069537
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAA
EST: AAGAGTTTTGCTGCAATGGGACTGTTGTCCANGACC-AGAGCTTGGGCAG GTCATTCAACTTCAEST: gi|33664638|gb|CF295605.1|CF295605
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTEST: gi|10930809|gb|AU161083.1|AU161083
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTAEST: gi|11026483|gb|AU163084.1|AU163084
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTA
EST: AGAGTTTTGCTGCAATGGTACTGTTGTCCAGGGNCCCAGAGCTTGGCCAG GTCATTCAACTTCAAGGGTGATCAGNGGGAAAACGGTATCAAAATTTTCTTEST: gi|33658705|gb|CF281318.1|CF281318
genomic: AGAGTTTTGCTGCAATGGTACTGTTGTCCAGGA-CCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCA-GGGTGATCAGAGGAAAAACG-TATCAAA-TTTTCTT
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGGTGATCAGAGGAAAAACGTATCAAEST: gi|5003721|gb|AU068870.1|AU068870
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGG-TGATCAGAGGAAAAACGTATCAA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAEST: gi|33654421|gb|CF277035.1|CF277035
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGA
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGGTGATCAGAGGAAAAACGTATCAAEST: gi|1632623|gb|C20352.1|C20352
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGG-TGATCAGAGGAAAAACGTATCAA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGNTTNGCCAG GTCATTNA-CTTCAGGGTGATCAGAGGAAAA-CG-ATCAAATTTEST: gi|55408730|gb|CV721106.1|CV721106
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGEST: gi|33659713|gb|CF282326.1|CF282326
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAG
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGGTGATCAGAGGAAAAACCGTATCAAATTTTCTTGEST: gi|27576503|gb|CA999197.1|CA999197
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGG-TGATCAGAGGAAAAAC-GTATCAAATTTTCTTG
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTEST: gi|11233414|gb|AU164826.1|AU164826
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTT
EST: AGAGTTTTGCTGCAATGGTACTGTTNGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGGAAAAAACGNATCAAATTTTCTTGEST: gi|567988|gb|D38823.1|D38823
genomic: AGAGTTTTGCTGCAATGGTACTGTT-GTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGG-AAAAA-CGTATCAAATTTTCTTG
EST: AGAGTTTTGCTGCAATGGTACTGTTNGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGGAAAAAACGNATCAAATTTTCTTGEST: gi|88979298|gb|CI025800.1|CI025800
genomic: AGAGTTTTGCTGCAATGGTACTGTT-GTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGG-AAAAA-CGTATCAAATTTTCTTG
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTTEST: gi|88360506|gb|CI608432.1|CI608432
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTTCTTGTT
EST: AGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAEST: gi|55440529|gb|CV733575.1|CV733575
genomic: AGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCC-AGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTEST: gi|88349176|gb|CI678149.1|CI678149
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCEST: gi|33658377|gb|CF280990.1|CF280990
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATC
EST: AGAGTTTTGCTGCAATGGNTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGGTGATCAGAGGAAAAACGTATCAAEST: gi|88574842|gb|CI666611.1|CI666611
genomic: AGAGTTTTGCTGCAATGG-TACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGG-TGATCAGAGGAAAAACGTATCAA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTTEST: gi|88440877|gb|CI693452.1|CI693452
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGGAAAAACGTATCAAATTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAEST: gi|10931162|gb|AU161436.1|AU161436
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCA
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGGCAG GTCATTCAACTTEST: gi|88731374|gb|CI754987.1|CI754987
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTT
EST: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTCAGGGTGATCAGAGGEST: gi|33809918|gb|CF330847.1|CF330847
genomic: AAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTCAGGGTGATCAGAGG
EST: AGAGTTTTGCTGCAATGGTACCTGTTGTCCAGGACCCAGAGCTTGGCCAG GTCATTCAACTTC
genomic: AGAGTTTTGCTGCAATGGTAC-TGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaa ... cactctgtagGTCATTCAACTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGATTGAAGAAGGAATTCAGCTACAACAAGATCCTCAAAGATCTCAAGAAAGAGTTTTGCTGCAATGGTACTGTTGTCCAGGACCCAGAGCTTGGCCAGgtgtgtgtaataaccgaaatttgtggtgcctgatctttacgtttttctatctttctgagctagtttttctgatcaatgcttcactctgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT