1 5' 3' | 2 5' 3' | 3 5' 3' |
AATGGTCTTGCCACTAAGGTAGAGAAGTCACGTAAGCAGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtaccaagtatcaacccagcattttgagcatttatgttaacaatattgcaatagtatttaggtagcttcaacttcagtcttcagtgcgtgacctaacttcgtgttatctgctaattttgtag
species | Oryza sativa |
transcript | LOC_Os06g36160.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88843427|gb|CI372327.1|CI372327
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCCTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88501878|gb|CI429384.1|CI429384
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCNTGGTGTGAAGAAG ACAAAGGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTEST: gi|88265890|gb|CI376792.1|CI376792
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAA-GGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTT
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88240823|gb|CI238674.1|CI238674
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88204674|gb|CI204523.1|CI204523
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|15850357|gb|BI798633.1|BI798633
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAA-GAAGATCCGTGGTGTGAAGAAG ACCAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGA--TGATACTCATCTTGEST: gi|88848323|gb|CI086845.1|CI086845
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|4714308|gb|AU058275.1|AU058275
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|8527927|gb|AU092742.1|AU092742
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGANCAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|3767256|gb|AU031366.1|AU031366
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGANCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88366065|gb|CI548312.1|CI548312
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88254045|gb|CI352671.1|CI352671
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|86863852|gb|CI332854.1|CI332854
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|89170709|gb|CI039986.1|CI039986
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACCAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88209028|gb|CI208877.1|CI208877
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|3106802|gb|D42527.1|D42527
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AAAGAAGATCCGTGGTGTGNAGAAG ACAAAGGCTGGAGATGCTGGNNAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88481214|gb|CI418485.1|CI418485
genomic: AAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAN ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88546275|gb|CI475895.1|CI475895
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88526630|gb|CI454706.1|CI454706
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88520551|gb|CI448205.1|CI448205
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|86522355|gb|CI162561.1|CI162561
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88320321|gb|CI523064.1|CI523064
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88527329|gb|CI455476.1|CI455476
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88550462|gb|CI478439.1|CI478439
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88219151|gb|CI220424.1|CI220424
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|89186230|gb|CI262062.1|CI262062
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|86493081|gb|CI135714.1|CI135714
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88980167|gb|CI026456.1|CI026456
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|8594842|gb|AU093380.1|AU093380
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88519381|gb|CI447035.1|CI447035
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88239271|gb|CI240433.1|CI240433
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88212728|gb|CI212368.1|CI212368
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88441608|gb|CI554832.1|CI554832
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88974571|gb|CI022112.1|CI022112
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|86251371|gb|CI055504.1|CI055504
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88208636|gb|CI208485.1|CI208485
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88903251|gb|CI088789.1|CI088789
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88238593|gb|CI238442.1|CI238442
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG GCAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88382206|gb|CI533410.1|CI533410
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTCAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88456609|gb|CI547325.1|CI547325
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88481525|gb|CI418796.1|CI418796
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|89196939|gb|CI021779.1|CI021779
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88963510|gb|CI029310.1|CI029310
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88481340|gb|CI418611.1|CI418611
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGGACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88243696|gb|CI242818.1|CI242818
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|86595148|gb|CI260387.1|CI260387
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAGCAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88482135|gb|CI419406.1|CI419406
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|30229440|gb|CB967331.1|CB967331
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88250996|gb|CI349226.1|CI349226
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|86859457|gb|CI278864.1|CI278864
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|86529974|gb|CI170180.1|CI170180
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|58653510|gb|CK042190.1|CK042190
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGT--GAGATGATACTCATCTTGEST: gi|87025919|gb|CI282496.1|CI282496
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|38468332|gb|CF952463.1|CF952463
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGA--TGATACTCATCTTGEST: gi|8335108|gb|BE040092.1|BE040092
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGA--TGATACTCATCTTGEST: gi|88471339|gb|CI408610.1|CI408610
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88546309|gb|CI475935.1|CI475935
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTGEST: gi|88286602|gb|CI517713.1|CI517713
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
EST: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG ACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
genomic: AGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtacca ... aattttgtagACAAAGGCTGGAGATGCTGGGAAGAAGAAGTGAGAGATGATACTCATCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATGGTCTTGCCACTAAGGTAGAGAAGTCACGTAAGCAGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAGgtcagtaccaagtatcaacccagcattttgagcatttatgttaacaatattgcaatagtatttaggtagcttcaacttcagtcttcagtgcgtgacctaacttcgtgttatctgctaattttgtag
- - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG