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AGGATCCGTCATGTATGGATTCAAGGGAGGTCCAGCTGGAGTCATGAAGTGCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGgtatagcaacttagattcactaagcatgctattgggtcgaaaattcgacaggtgcctattctctgattttctgtaaatcatgttagtttagtaggtggtg...
species | Oryza sativa |
transcript | LOC_Os06g13810.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAG GGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAGEST: gi|218497540|gb|FG953486.1|FG953486
genomic: GCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGgtatagcaac ... tttttgatagGGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAG
EST: GCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAG AGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAGEST: gi|58675628|gb|CK064315.1|CK064315
genomic: GCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGgtatagcaac ... tttttgatagGGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAG
EST: GCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAG GGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAG
genomic: GCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGgtatagcaac ... tttttgatagGGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGATCCGTCATGTATGGATTCAAGGGAGGTCCAGCTGGAGTCATGAAGTGCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGgtatagcaacttagattcactaagcatgctattgggtcgaaaattcgacaggtgcctattctctgattttctgtaaatcatgttagtttagtaggtggtg
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