Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTTGAGTTATTCAACCAGAACTATTCAGATTCAGAAGAGTGGAGGCAAATGTTTTTCAGGTCAAATGCTAAATCTGACAGGGCGCCATATCCACCTTGGgtgtgtaaacttgcctgaactcgtaattgtcttgtcagtactactatgaatgcagtattctaacttttgagttacaacaaaactttaaag

Basic information

species Oryza sativa
transcript LOC_Os02g56500.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|25806441|gb|CA762402.1|CA762402
EST:     TGTTTTTCAGGTCAAATGCTAAATCTGACAGGGCGCCATATCCACCTTGG                         ATTGCAGGATCAGATGAAGAAAACTATCCACTGACCAGACAAGTGCAGAGA
genomic: TGTTTTTCAGGTCAAATGCTAAATCTGACAGGGCGCCATATCCACCTTGGgtgtgtaaac ... aactttaaagATTGCAGGATCAGATGAAGAAAACTATCCACTGACCAGACAAGTGCAGAGA