Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgcttcttcttaatctcccgttaattctaattctgtgccgatgcagcagtagatgtaagtgctgattcagccatgaattgcatggtttcagtt...

Basic information

species Oryza sativa
transcript LOC_Os02g47870.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g47870.1 (Oryza sativa), 5'ss of exon 3
lower sequence: GRMZM2G361074_T02 (Zea mays), 5'ss of exon 1
----------------------------------------GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgcttcttcttaatctcccgttaattctaattctgtgccga-tgcagcagtagatgtaagtgctgattcagc---catgaattgcatggtttcagtt
                                        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  |   |  |    |    |     | |   | ||  ||| |||||   | | | |  |||   |  || |   | |  ||||   |||  | |  
CCTCGCTTGTTGTGGCGGTCCGCGTCTGTCTGTTGTGTAGGCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtatgattcatatctactttctttgtttgccccccatccccgtatcgaatgcagggtttgctct--gtgtaaacccaacgttcttttattgtgcggtggctg--

upper sequence: LOC_Os02g47870.1 (Oryza sativa), 5'ss of exon 3
lower sequence: GRMZM2G361074_T01 (Zea mays), 5'ss of exon 3
GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgcttcttcttaatctcccgttaattctaattctgtgccga-tgcagcagtagatgtaagtgctgattcagc---catgaattgcatggtttcagtt
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  |   |  |    |    |     | |   | ||  ||| |||||   | | | |  |||   |  || |   | |  ||||   |||  | |  
GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtatgattcatatctactttctttgtttgccccccatccccgtatcgaatgcagggtttgctct--gtgtaaacccaacgttcttttattgtgcggtggctg--

upper sequence: LOC_Os02g47870.1 (Oryza sativa), 5'ss of exon 3
lower sequence: GLYMA12G32060.3 (Glycine max), 5'ss of exon 3
GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacatt----gcttcttcttaatctcccgttaattctaattctgtgccgatgcagcagtagatgtaagtgctgattcagccatgaattgcatggtttcagtt
| || ||||||||||| |||||||| |||||||| |||||||| ||||| || ||||||||||   |     ||   ||  || ||||| ||||| |       | ||   || |     |   | ||  | ||  ||   || ||||||   |||        
GTATTGAGTGCCAGGCCAACCAGGCTAGCGCCACTAGCGAGGAATGCACTGTAGCTTGGGgtacgctctgaagccctttaatattctcctgttaaatgcgtcattttgttcattcc-tgttttttttatctacttgttttcccctgaattagttggggatt---

upper sequence: LOC_Os02g47870.1 (Oryza sativa), 5'ss of exon 3
lower sequence: EFJ06425 (Selaginella moellendorffii), 5'ss of exon 2
----------------------------------------GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgcttcttcttaatctcccgttaattctaattctgtgccgatgcagcagtagatgtaagtgctgattcagccatgaattgcatggtttcagtt
                                        |||||||||||||||| |||||||| |||||||| ||||| || |||||||| || |||||||| |     |  || ||            |  |  || |||| | |||||  |     | |  |||  ||| |||                       
GACAACTGCGCGATTTGCCGGAATCACATCATGGATCTGTGCATCGAGTGCCAGGCAAACCAGGCCAGCGCCACGAGCGAAGAATGCACCGTTGCCTGGGgtaagagaagatgatcatagctc--------tattggttttgtgacaatgcaaaacacactctttgtg--gatccag-----------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86602211|gb|CI262680.1|CI262680
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|86824548|gb|CI263034.1|CI263034
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88584483|gb|CI702038.1|CI702038
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|87026736|gb|CI254842.1|CI254842
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88310527|gb|CI659317.1|CI659317
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|163929443|gb|EG713412.1|EG713412
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|58586941|gb|CF985249.1|CF985249
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88537330|gb|CI465161.1|CI465161
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88355555|gb|CI679275.1|CI679275
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|86897276|gb|CI294334.1|CI294334
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88591378|gb|CI707408.1|CI707408
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88577100|gb|CI673655.1|CI673655
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|55434732|gb|CV730490.1|CV730490
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|86531631|gb|CI171837.1|CI171837
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88572104|gb|CI663675.1|CI663675
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88398748|gb|CI598713.1|CI598713
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAG
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTT-GCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAG
EST: gi|88329496|gb|CI648558.1|CI648558
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|58585864|gb|CF984172.1|CF984172
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88477901|gb|CI415172.1|CI415172
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|86534249|gb|CI174455.1|CI174455
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|55434734|gb|CV730491.1|CV730491
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|86431314|gb|CI084925.1|CI084925
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|3759878|gb|C97136.1|C97136
EST:     CCA-GCGAACCAGGCGAGCGCCACCNGCGAGGANTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCCA-CCGTTGGCTCAAG
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCAT-CAGCCGTTGGCTCAAG
EST: gi|88503232|gb|CI430738.1|CI430738
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|55441579|gb|CV734113.1|CV734113
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88344293|gb|CI655687.1|CI655687
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88346056|gb|CI633929.1|CI633929
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGNGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88976245|gb|CI024462.1|CI024462
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88305115|gb|CI652052.1|CI652052
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88252851|gb|CI350276.1|CI350276
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88556594|gb|CI486932.1|CI486932
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88848550|gb|CI087072.1|CI087072
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGTACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88523676|gb|CI451524.1|CI451524
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88238846|gb|CI236697.1|CI236697
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88385361|gb|CI630462.1|CI630462
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGGAACCATGCATTCCACTTNCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88483270|gb|CI420541.1|CI420541
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88410530|gb|CI686468.1|CI686468
EST:     CCAGCCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCANTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88484351|gb|CI421622.1|CI421622
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|38478406|gb|CF962539.1|CF962539
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88556822|gb|CI487179.1|CI487179
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|5004079|gb|AU069228.1|AU069228
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTT
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTT
EST: gi|88717453|gb|CI740963.1|CI740963
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88540782|gb|CI468852.1|CI468852
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88556939|gb|CI487304.1|CI487304
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88466397|gb|CI529806.1|CI529806
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88488493|gb|CI425764.1|CI425764
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88526824|gb|CI454913.1|CI454913
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCACCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88538461|gb|CI467494.1|CI467494
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88451823|gb|CI694594.1|CI694594
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|25800584|gb|CA756545.1|CA756545
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|15851044|gb|BI799320.1|BI799320
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88503235|gb|CI430741.1|CI430741
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|55437350|gb|CV731894.1|CV731894
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88538806|gb|CI467867.1|CI467867
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|33808930|gb|CF330351.1|CF330351
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88360682|gb|CI647692.1|CI647692
EST:     GCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88294972|gb|CI522926.1|CI522926
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88762328|gb|CI771884.1|CI771884
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88571713|gb|CI663086.1|CI663086
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88210386|gb|CI210235.1|CI210235
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88289393|gb|CI555755.1|CI555755
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88310490|gb|CI659280.1|CI659280
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88338016|gb|CI676999.1|CI676999
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88463910|gb|CI527237.1|CI527237
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|86846893|gb|CI283052.1|CI283052
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGGGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88424041|gb|CI689740.1|CI689740
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|86820890|gb|CI357631.1|CI357631
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|33808928|gb|CF330350.1|CF330350
EST:     CAGGCGAACCAGGCGAGCGCCACCAGCGAGAGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CAGGCGAACCAGGCGAGCGCCACCAGCGAG-GAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88348428|gb|CI629917.1|CI629917
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|58607531|gb|CK035564.1|CK035564
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88344290|gb|CI655684.1|CI655684
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|218496814|gb|FG947952.1|FG947952
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|55441581|gb|CV734114.1|CV734114
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88543776|gb|CI473812.1|CI473812
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88358824|gb|CI649373.1|CI649373
EST:     CCACGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|55433516|gb|CV729865.1|CV729865
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88530088|gb|CI457424.1|CI457424
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88485324|gb|CI422595.1|CI422595
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88282992|gb|CI404240.1|CI404240
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|86534541|gb|CI174747.1|CI174747
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88511991|gb|CI439497.1|CI439497
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88278569|gb|CI399569.1|CI399569
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88340685|gb|CI647563.1|CI647563
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|55438491|gb|CV732542.1|CV732542
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|55438489|gb|CV732541.1|CV732541
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|87019232|gb|CI279742.1|CI279742
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATTAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|15008499|gb|AU222887.1|AU222887
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88480620|gb|CI417891.1|CI417891
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88438729|gb|CI546211.1|CI546211
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|86889691|gb|CI299889.1|CI299889
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88313926|gb|CI599928.1|CI599928
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88739428|gb|CI762936.1|CI762936
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88507265|gb|CI434771.1|CI434771
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|87025864|gb|CI282441.1|CI282441
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88848429|gb|CI086951.1|CI086951
EST:     CCAGGCGAACCAGGCGAGCGCAACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTC-A-A
EST: gi|10423655|gb|AU108186.1|AU108186
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88988503|gb|CI037740.1|CI037740
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|56158480|gb|AU088576.2|AU088576
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTTGCATCAGCCGTTGGCTCAAG
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACT-GCATCAGCCGTTGGCTCAAG
EST: gi|88305570|gb|CI631937.1|CI631937
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGAATCAGNCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88256243|gb|CI358631.1|CI358631
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88278610|gb|CI399610.1|CI399610
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|568841|gb|D39690.1|D39690
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88590651|gb|CI707528.1|CI707528
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88279141|gb|CI400141.1|CI400141
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88512714|gb|CI440220.1|CI440220
EST:     CCAGGCGGACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGGCCGTTGGCTCAAG
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCA-GCCGTTGGCTCAAG
EST: gi|58687844|gb|CK076531.1|CK076531
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88507295|gb|CI434801.1|CI434801
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGA
EST: gi|88589297|gb|CI707165.1|CI707165
EST:     CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGG                         GAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCA
genomic: CCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 60 (upstream exon), 72 (downstream exon)
Score: 30

GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgc ... gttgtgtcagGAGTTTGCAACCATGCATTCCACTTCCACTGCATCAGCCGTTGGCTCAAGACCCGTCAAGTGTGCCCTCTAG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCATCGAGTGCCAGGCGAACCAGGCGAGCGCCACCAGCGAGGAGTGCACCGTCGCTTGGGgtaacattgcttcttcttaatctcccgttaattctaattctgtgccgatgcagcagtagatgtaagtgctgattcagccatgaattgcatggtttcagtt

- - - - - - - - - - - - - - - - - - - GAGGAG