Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataattgttttgtctctctaagttgattttactgagctgctgaactgtttgtctgatcaaaccttaatccggaaacag

Basic information

species Oryza sativa
transcript LOC_Os02g37430.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g37430.1 (Oryza sativa), 5'ss of exon 3
lower sequence: GRMZM2G416061_T01 (Zea mays), 5'ss of exon 4
GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataattgttttgtctctctaag---ttgattttactgagctgctgaactgtttgtctgatcaaaccttaatccggaaacag
||||||||||| |||||||| || |||||||||||| ||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||| ||| | |||  ||    | |||   |  | | |    | ||  ||    | |||||    |  |  | | ||| |  ||| |||   || |||
GGAAACAACATCCGCTATTATATCCTTCCTGACAGCCTAAACCTGGAGACTTTGCTGGTTGAGGAAACACCAAGGGTCAAGCCTAAGAAGCCTACTTCTGgtcagagttctttttctcccatttcaaccttcgagatttaccacctgctagcattatcatttcatcca-tcttcatcaaaaaccag

upper sequence: LOC_Os02g37430.1 (Oryza sativa), 5'ss of exon 3
lower sequence: GLYMA02G10640.1 (Glycine max), 5'ss of exon 4
GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgt-ttgataattgttttgtctctctaagttgattt-tactgagctg--ctgaactgtttgtc--tga-----tcaaaccttaatccggaaacag-----------------
|| |||||||| || || || ||||||||||||||||| || || ||||| |||||||| || || ||||| | | ||||  | |||||||||||||| |||  || | || ||||     |   |  || ||   |||| |  |      || ||||| |   |||      ||    |||||      | |                  
GGTAACAACATCCGTTACTATATTCTTCCTGACAGCTTGAATCTTGAGACCTTGCTGGTGGAAGAGACACCCAAGATCAAACCCAAGAAGCCAACTGCTGgtactgtttatagtttgactacaaaattttcatccatactcaattcactctaattgtttcttggtgagttccccaggttttaattttagcatattttcattacatttccag

upper sequence: LOC_Os02g37430.1 (Oryza sativa), 5'ss of exon 3
lower sequence: GLYMA19G33700.1 (Glycine max), 5'ss of exon 3
GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataattgttttgtctctctaagttgattttactgagctgctgaactgtttgtctgatcaaaccttaatccggaaacag-------------------------------
|| ||||||||||| ||||| || |||||||||||||| || || ||||| || |||||||| ||  | || | | ||||| |||||||||||||||| ||| |  ||  |  |||| || || |     || ||  | ||  ||  |    | |||        ||  | |||  | || |                                
GGCAACAACATTCGATATTATATCCTTCCTGACAGCTTGAATCTTGAGACTTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtatattatttgactttc-actagaatgtttatcagaggccaa---ttatgttcaggttgactgttatctaggaatatctggttctcaaagttttgattttatttacag

upper sequence: LOC_Os02g37430.1 (Oryza sativa), 5'ss of exon 3
lower sequence: GLYMA03G30880.1 (Glycine max), 5'ss of exon 3
GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgata-attgttttgtc-tctctaagttgattttactgagctgctgaact---gtttgtctg--atcaaaccttaatccggaaacag--------------------
|| ||||||||||| ||||| || |||||||||||||| || || ||||| || |||||||| ||  | || | | ||||| |||||||||||||||| ||| |  || ||| |||     || ||||  || || |    || |  | |  |   | ||| |||  |||||    ||    |    ||                     
GGCAACAACATTCGATATTATATCCTTCCTGACAGCTTGAATCTTGAGACTTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtatattatttgactgtcactaaaatgtttatcagaagttaattatgttcaggttgactgttatcaagggatatctggttctcaaagttttgattttatttgcag

upper sequence: LOC_Os02g37430.1 (Oryza sativa), 5'ss of exon 3
lower sequence: AT3G07590.1 (Arabidopsis thaliana), 5'ss of exon 3
GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgt-----ttgataattgttttgtctctctaa-gttgattttactgagctgctgaactg-tttgtctgatcaaaccttaatccggaaacag------------
|| || || |||||||| |||||||||||||| ||||| ||||| ||||| || || || || || || || || || ||  ||||||||||   ||| |||     || ||   | ||| || | | |||  ||  | ||  | ||||     |||  ||| || |  ||    ||  | |                    
GGTAATAATATTCGCTACTACATTCTTCCTGATAGCTTGAACCTCGAGACTTTACTTGTGGAAGACACTCCTAGAGTTAAACCTAAGAAGCCTGTTGCTGgtactgcttcattcatttttggtgtttgtaatattcgtcttcataagctaaaagacttctttatcagtccatttattcgttctctctttctttcttctttag

upper sequence: LOC_Os02g37430.1 (Oryza sativa), 5'ss of exon 3
lower sequence: AT4G02840.2 (Arabidopsis thaliana), 5'ss of exon 4
GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataattgttttgtctctctaagttgattttactgagctgctgaactgtttgtctgatcaaaccttaatccggaaacag----------
|||||||||||||||||||| |||||||| ||||| || || |||||||| ||||||||||| || || || ||  ||||  | || |||||||||||||||   | ||   |||  | | ||| |  |     |       || |    | ||||  |   |  | |||  |   |                
GGAAACAACATTCGCTATTATATTCTTCCGGACAGTTTGAATCTGGAGACTTTGCTGGTTGAAGACACTCCAAGAATCAAACCCAAAAAGCCAACTGCAGgtaaca-aaacatttcttttttctgaactatgcctttgtttttgtttttgtttttgcttagactcatctttctattgttctctttggtatcag

upper sequence: LOC_Os02g37430.1 (Oryza sativa), 5'ss of exon 3
lower sequence: Vv07s0104g00160.t01 (Vitis vinifera), 5'ss of exon 5
GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataattgttttgtctctctaagttgattttactgagctgctgaactgtttgt-ctgatcaaaccttaatccggaaacag-----------------
|| ||||||||||| ||||| || ||||| |||||||| || || |||||  |  |||| || || ||||| ||||||||| | ||||||||||| ||||||      |||| | | ||||| |   |  | ||   ||   |   | |   ||| |  |   |     |||||        |                  
GGCAACAACATTCGGTATTATATCCTTCCCGACAGCTTGAATCTTGAGACCCTTTTGGTGGAAGAGACACCTAGGGTCAAGCCCAAGAAGCCAACCGCAGgt------attgctctatctctttggctctaattctatgcattttcgtatgatttatgttccccttgttttaattttttttaatgcttttttccatttcag

upper sequence: LOC_Os02g37430.1 (Oryza sativa), 5'ss of exon 3
lower sequence: Vv19s0015g01330.t01 (Vitis vinifera), 5'ss of exon 3
GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataattgttttgtctctctaagttgattttactgagct-gctgaactgtttgtctgatcaaaccttaatccggaaacag------
|| ||||| ||||| ||||| || ||||| |||||| |||| ||||||||||||||||| || || ||||| ||||||||| | |||||||||||||| ||| |   |    | ||  |  | | | ||   |    || | | | | ||   ||| |   ||      ||||| |    | |       
GGCAACAATATTCGGTATTATATACTTCCCGACAGCATAAATCTGGAGACATTGCTGGTGGAAGAGACACCTAGGGTCAAGCCCAAGAAGCCAACTGCTGgtattgca----tatttcccttttgacttatataccttgtgatagattaatactttttaaaatttttttttaatgcctctataaatccag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88516497|gb|CI444151.1|CI444151
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88517443|gb|CI445097.1|CI445097
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGA-GCCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGC
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCC-TTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGC
EST: gi|88503442|gb|CI430948.1|CI430948
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|15851431|gb|BI799707.1|BI799707
EST:     TTTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88488227|gb|CI425498.1|CI425498
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88409296|gb|CI559394.1|CI559394
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|86827063|gb|CI268901.1|CI268901
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|4880073|gb|AU064372.1|AU064372
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTNGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|58686818|gb|CK075505.1|CK075505
EST:     TTTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88281658|gb|CI403054.1|CI403054
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88552568|gb|CI482586.1|CI482586
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|89199069|gb|CI255335.1|CI255335
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88211519|gb|CI211159.1|CI211159
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88290214|gb|CI550436.1|CI550436
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|12622937|gb|AU173150.1|AU173150
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88437950|gb|CI536109.1|CI536109
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88520398|gb|CI448052.1|CI448052
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88509002|gb|CI436508.1|CI436508
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88474378|gb|CI411649.1|CI411649
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|8336867|gb|BE041115.1|BE041115
EST:     TTTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88832522|gb|CI019463.1|CI019463
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88490768|gb|CI428040.1|CI428040
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|8956550|gb|BE230465.1|BE230465
EST:     TTTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|3762666|gb|AU029418.1|AU029418
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAANCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88289097|gb|CI520427.1|CI520427
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88419999|gb|CI516448.1|CI516448
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88486394|gb|CI423665.1|CI423665
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88489580|gb|CI426852.1|CI426852
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|11610356|gb|AU166032.1|AU166032
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|24208896|gb|AU225923.1|AU225923
EST:     GCTGGTTGAGGATACAACCCGAGGGTACAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: GCTGGTTGAGGATAC-A-CCGAGGGT-CAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|87013601|gb|CI267302.1|CI267302
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|3107844|gb|D43584.1|D43584
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGNGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|58695967|gb|CK084654.1|CK084654
EST:     TTTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88955437|gb|CI091529.1|CI091529
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|86250846|gb|CI007709.1|CI007709
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88322378|gb|CI540346.1|CI540346
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88550525|gb|CI478507.1|CI478507
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|12622938|gb|AU173151.1|AU173151
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88478500|gb|CI415771.1|CI415771
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88437742|gb|CI533699.1|CI533699
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|86423420|gb|CI062181.1|CI062181
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88511152|gb|CI438658.1|CI438658
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88517623|gb|CI445277.1|CI445277
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88477741|gb|CI415012.1|CI415012
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88490235|gb|CI427507.1|CI427507
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88558847|gb|CI489373.1|CI489373
EST:     GAGGGTCAAGGCTAAGAAGCCAACTNGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGTTCGTGGGCGCGGTCGTGGC
genomic: GAGGGTCAAGGCTAAGAAGCCAACT-GCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGC
EST: gi|88743395|gb|CI766903.1|CI766903
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGG
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGG
EST: gi|88473381|gb|CI410652.1|CI410652
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGGTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGATCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|29689672|gb|CB685947.1|CB685947
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88238454|gb|CI238303.1|CI238303
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88553975|gb|CI484122.1|CI484122
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|86529539|gb|CI169745.1|CI169745
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88554960|gb|CI485176.1|CI485176
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGGTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|3766898|gb|AU031008.1|AU031008
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGNGCGCGGCCGTGG
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGG
EST: gi|88289705|gb|CI522838.1|CI522838
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88517948|gb|CI445454.1|CI445454
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88552385|gb|CI482388.1|CI482388
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88514453|gb|CI441959.1|CI441959
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|87013532|gb|CI267233.1|CI267233
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88511240|gb|CI438746.1|CI438746
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88847969|gb|CI006155.1|CI006155
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88490902|gb|CI428174.1|CI428174
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|3762685|gb|AU029437.1|AU029437
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88513223|gb|CI440729.1|CI440729
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|86824350|gb|CI262903.1|CI262903
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|38474190|gb|CF958322.1|CF958322
EST:     TTTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88531482|gb|CI459961.1|CI459961
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88541594|gb|CI470873.1|CI470873
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAANCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88478687|gb|CI415958.1|CI415958
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88282678|gb|CI404074.1|CI404074
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88475138|gb|CI412409.1|CI412409
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88557212|gb|CI487601.1|CI487601
EST:     CTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: CTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88514938|gb|CI442592.1|CI442592
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|87013602|gb|CI267303.1|CI267303
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88446153|gb|CI552659.1|CI552659
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88554648|gb|CI484839.1|CI484839
EST:     ATTGCTGGTTGAGAATACACCGAGGGTCAAGGCTAAGAAGCCAACTACAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88512618|gb|CI440124.1|CI440124
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88523925|gb|CI451792.1|CI451792
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCNCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|86593782|gb|CI266462.1|CI266462
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|87024811|gb|CI261320.1|CI261320
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|86256610|gb|CI061373.1|CI061373
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88506964|gb|CI434470.1|CI434470
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88513549|gb|CI441055.1|CI441055
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTNCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|8857519|gb|AU094837.1|AU094837
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88277556|gb|CI398358.1|CI398358
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|25802948|gb|CA758909.1|CA758909
EST:     TTTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88837992|gb|CI371570.1|CI371570
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGGC
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGG-C
EST: gi|88542663|gb|CI472005.1|CI472005
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|58668844|gb|CK057530.1|CK057530
EST:     TTTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|88283304|gb|CI404750.1|CI404750
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAANCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|2442320|gb|C74091.1|C74091
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
EST: gi|2442894|gb|C74665.1|C74665
EST:     ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAG                         GGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA
genomic: ATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 71 (upstream exon), 58 (downstream exon)
Score: 39

GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataat ... ccggaaacagGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCAGGGGACGCTGAGCTTCACTCCAGTTCCCTATCTTGGAAACTTTTGCATC




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGgtttgataattgttttgtctctctaagttgattttactgagctgctgaactgtttgtctgatcaaaccttaatccggaaacag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG