Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88386076|gb|CI570711.1|CI570711EST: TCTGTTCAGTTAAGCACTGTCAATGCATGGAGACATTCTCAG AGCTATTCAAGGGACCAGAAATTAGCATTGATGGAAATATTCGATGTTCTG
genomic: TCTGTTCAGTTAAGCACTGTCAATGCATGGAGACATTCTCAGgtaccaatct ... gatcttgcagAGCTATTCAAGGGACCAGAAATTAGCATTGATGGAAATATTCGATGTTCTG
EST:
gi|29674103|gb|CB670378.1|CB670378EST: GTCTGTTCAGTTAAGCACTGTCAATGCATGGAGACATTCTCAG AGCTATTCAAGGGACCAGAAATTAGCATTGATGGAAATATTCGATGTTCTG
genomic: GTCTGTTCAGTTAAGCACTGTCAATGCATGGAGACATTCTCAGgtaccaatct ... gatcttgcagAGCTATTCAAGGGACCAGAAATTAGCATTGATGGAAATATTCGATGTTCTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCTGTTCAGTTAAGCACTGTCAATGCATGGAGACATTCTCAGgtaccaatctactacacagtcagtgcacatggagagctcattaattcaacattttcttgctttacttgatcttgcag
- - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - TGGAGA