Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88392740|gb|CI623971.1|CI623971EST: GCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAG CACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
genomic: GCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAGgtaatcagtc ... tattctgcagCACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
EST:
gi|88360340|gb|CI612059.1|CI612059EST: GCAATAATACCTAGAGGCTACAACTACAAGCTCAAGTCAAGCCCCAGAAG CACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
genomic: GCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAGgtaatcagtc ... tattctgcagCACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
EST:
gi|88354792|gb|CI614070.1|CI614070EST: GCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAG CACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
genomic: GCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAGgtaatcagtc ... tattctgcagCACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
EST:
gi|88362257|gb|CI608648.1|CI608648EST: GCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAG CACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
genomic: GCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAGgtaatcagtc ... tattctgcagCACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
EST:
gi|88290545|gb|CI666918.1|CI666918EST: GCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTTAAGCCCCAGAAG CACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
genomic: GCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAGgtaatcagtc ... tattctgcagCACTAAGGCAATGGCAGAAGCTGTGCTGCTTGCCATCTCAAAGATCAGTAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGCAGGGTTTTCATCACATTATTTCGCCAACTGCTGCAATAATACCTAGAGGCTAGAACTACAAGCTCAAGTCAAGCCCCAGAAGgtaatcagtctcaaatgtttgcatcctctcatatatttatctctttggctgatgttatattgagttgctacggccatctgcttcagtttagataaagaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA