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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcactcacctactctctctctctctctcttttgcttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttgga...

Basic information

species Oryza sativa
transcript LOC_Os11g06750.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G324314_T05 (Zea mays), 5'ss of exon 2
---AGGAGGAGTAAG--AAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac-tcacctactctctctctctctctcttttgcttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttgga
   |||| ||| | |  | |||||||||| | ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||| || | | || | ||||| ||| ||  ||| |||   ||||| | |    ||                                              
GTAAGGAAGAGGAGGGCAGGATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCcctcggcttccttcccaggaagcgctcctcccgtcaccgcggcaagggtacgcgcgcatctcttactccctc-cttgctcgcttgc-cttgttccgatacgt----------------------------------------------

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G135727_T01 (Zea mays), 5'ss of exon 2
-AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac-tcacctactctctctct-ctctctcttttgcttgtgcggtgctgtatttgtagagct-tgcgccttgtatggtagagtagaaacttgttgga
 ||||||||    | |||||||||| | ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||| || | | || | ||||| |||  |  || ||    |  |   |        ||| || |  | | | | | |       ||||     || |  ||   
GAGGAGGAG-GGCAGGATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCCCTCGGCTTCCTTCCCAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtacgcgcgcatctcttactccctccttgttcgcttgccttgtcccgattcatgttatctgaaatgttctacccttcaacctttagaacttgaagt-atta--

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G135727_T03 (Zea mays), 5'ss of exon 2
------AGGAGGAGTAAG--AAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcactcacctactctctctctctctctcttttgcttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttgga
      | |||||| | |  | |||||||||| | ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||| || | |       ||||  ||| ||| ||  || |||||    || | | |||  |                                        
GTAAGGAAGAGGAGGAGGGCAGGATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCcctcggcttccttcccaggaagcgctcctcccgccaccgcggcaagggtacgcgcgcat-----ctcttactccctc-cttgttcgcttgccttgtcccg-attcat----------------------------------------

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM5G801409_T04 (Zea mays), 5'ss of exon 1
-AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac-tcacctactctctctctctctctcttttgcttgtgcggtgctgtatttgtagagct-tgcgccttgtatggtagagtagaaacttgttgga
 ||||||||    | |||||||||| | ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||| || | | || | ||||| ||||   || ||    |  ||  |    |    || || |  | | | | | |       ||||     || |  ||   
GAGGAGGAG-GGCAGGATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCCCTCGGCTTCCTTCCCAGGAAGCGCTCCTCCCGTCACCGCGGCAAGGgtacgcgcgcatctcttactccctcttgttcgcttgccttgttccgatacgtgtcatctgaaatgttctacccttcaacctttagaacttgaagt-attat-

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G132968_T02 (Zea mays), 5'ss of exon 2
-AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac-tcacctactctctctctctctctcttttgcttgtgcggtgc-tgt-atttgtagagcttgcgccttgtatggtagagtagaaacttgttgga
 ||||||||    | |||||||||| | ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||| || | | || | ||||| ||| ||   || |||    |    || | | ||| || || |  | |    ||||      |         |  | ||   
GAGGAGGAG-GGCAGGATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCCCTCGGCTTCCTTCCCAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtacgcgcgcatctcttactccctc-cttgttcgcttgccttgtcccgattcatgtcatctgaaatgttctacccttcagcatttagaacttgaagtatta--

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G324314_T03 (Zea mays), 5'ss of exon 2
-AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac-tcacctactctctctct-ctctctcttttgcttgtgcggtgctgtatttgtagagct-tgcgccttgtatggtagagtagaaacttgttgga
 | ||||||    | |||||||||| | ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||| || | | || | ||||| |||  | ||| ||    |  ||  |    |   ||| || |  | | | | | |       ||||     || |  ||   
GAAGAGGAG-GGCAGGATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCCCTCGGCTTCCTTCCCAGGAAGCGCTCCTCCCGTCACCGCGGCAAGGgtacgcgcgcatctcttactccctccttgctcgcttgccttgttccgatacgtgttatctgaaatgttctacccttcaacctttagaacttgaagt-atta--

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G109677_T07 (Zea mays), 5'ss of exon 3
-AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac-tcacctactctctctct-ctctctcttttgcttgtgcggtgctgtatttgtagagct-tgcgccttgtatggtagagtagaaacttgttgga
 ||||||||    | |||||||||| | ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||| |||| | || | ||||| |||| |  || ||    |  |   |    |    || || |  | | | | | |       ||||     || |  ||   
GAGGAGGAG-GGCAGGATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCCCTCGGCTTCCTTCCCAGGAAGCGCTCCTCCCGTCACCGCGGCAAGGgtacgctcgcatctcttactccctctttgttcgcttgccttgtcccgatacgtgtcatctgaaatgttctacccttcaacctttagaacttgaagt-atta--

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G109677_T03 (Zea mays), 5'ss of exon 4
------AGGAGGAGTAAG--AAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac-tcacctactctctctctctctctcttttgcttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttgga
      | |||||| | |  | |||||||||| | ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||| |||| | || | ||||| |||| | | || |||   ||||| | |    ||                                              
GTAAGGAAGAGGAGGAGGGCAGGATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCcctcggcttccttcccaggaagcgctcctcccgtcaccgcggcaagggtacgctcgcatctcttactccctctttgt-tcgcttgc-cttgtcccgatacgt----------------------------------------------

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM5G801409_T01 (Zea mays), 5'ss of exon 1
AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcactcacctactctctctctctctctcttttgcttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttgga
  ||||||    | |||||||||| | ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||| || | |        |||||  ||| ||||  || |||||    || | | ||  ||                                        
--GAGGAG-GGCAGGATGTCGCACCGTAAGTTCGAGCACCCGAGGCACGGCTCcctcggcttccttcccaggaagcgctcctcccgtcaccgcggcaagggtacgcgcgca-------tctcttactccctcttgttcgcttgccttgttccg-atacgtg---------------------------------------

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GLYMA12G36940.1 (Glycine max), 5'ss of exon 2
AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgt-atgctcactcacctactctctctctctc-tctcttttgcttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttgga
|    |   || |||||||| ||| | ||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||  | || || || ||||| |||||| || |||  |    |  | | | |   || | ||| ||| ||       | | ||  ||  |   ||  |  || | |  |    |  |||    ||   
AATTTGGAAAACAAGATGTCTCACCGCAAGTTCGAGCACCCGAGACACGGTTCCCTTGGCTTTCTCCCAAGGAAGCGAGCTTCTCGTCATCGCGGAAAGGgtgatcctcttttttttgttttgttttgttcgtttctgttgtttactttcagatttaaatgatgttgttaagggttttcttttcagatctaaaaacattt--

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GLYMA10G36780.1 (Glycine max), 5'ss of exon 2
AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgta-------tgctcactcacctactctctctctctctctcttttg-cttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttgga
     ||| |  | |||||| |||||||||||||||||||| |||||||| || || || || || || ||||||||  |  | || ||| | || || ||||       |  | | | | | | | |   |  |    | || || |||||| | |  | || || |   |  |     ||||    | |   ||  |         
-----GAGGAGAAGGATGTCTCACAGGAAGTTCGAGCACCCAAGGCACGGTTCACTGGGATTTCTTCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGgtaatttattttttaaattatccagtattcattacatggttttctgtcttgtgagttcttttaattatcatgaatagctgttgtgaatttgcaaagtcaa--------

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GLYMA20G30810.1 (Glycine max), 5'ss of exon 2
AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgta-tgctcactcacctactctctctctctctctctt--ttgcttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttgga
  |||||| |  | |||||| |||||||||||||||||||| |||||||| || || || || ||||| ||||||||  |  | || ||| | || || |||| | ||   |   ||  | |   |     |  | |  |||||  || |    | ||   ||| | |  |   ||  | || || |  |  |   ||  |  
--GAGGAGAATAAGGATGTCTCACAGGAAGTTCGAGCACCCAAGGCACGGGTCACTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGgtaattcttttttgtcttatgttctttcaattaacataattgctgttgtgaatttctaaa-gtaaaacaagatgctgttgtgttaaa-catgagtatgccga-

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GLYMA09G00280.1 (Glycine max), 5'ss of exon 2
AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcactcacctactctctctctctctctcttttgcttgtgcggtgctgtatttgtagagcttgcgccttgta--tggtagagtagaaacttgttgga-----------
 | |   | || |||||||| ||| ||||||||||||||||||| || || ||||| ||||| ||||| ||||||||  | || || || ||||| ||||||          | ||||  | | | | | |  |||| | | ||  | | ||||  ||    | || |    || ||  || |   | | |   || |  ||           
TGAATTTGGAAAAAGATGTCTCACCGGAAGTTCGAGCACCCGAGACATGGTTCCCTTGGCTTTCTCCCAAGGAAGCGAGCTTCTCGTCATCGCGGAAAGGgtg---------atctacattttttgtttgtacctttggat-gtttgatactgttcttc---atctcgacatttataaatgatgttgcaaagggttttcagatctaaaataac

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33654547|gb|CF277161.1|CF277161
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58608803|gb|CK036836.1|CK036836
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|33795571|gb|CF323655.1|CF323655
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|33682034|gb|CF310273.1|CF310273
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|27554206|gb|CA998106.1|CA998106
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|13164982|gb|AU173779.1|AU173779
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58600514|gb|CK011042.1|CK011042
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCCACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|117216971|gb|CT845288.1|CT845288
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88745183|gb|CI768543.1|CI768543
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58679138|gb|CK067825.1|CK067825
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58604279|gb|CK014807.1|CK014807
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88694145|gb|CI738183.1|CI738183
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88313070|gb|CI592354.1|CI592354
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|86900861|gb|CI304066.1|CI304066
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58600288|gb|CK010816.1|CK010816
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58609648|gb|CK037681.1|CK037681
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58653344|gb|CK042024.1|CK042024
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88741934|gb|CI764439.1|CI764439
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88693250|gb|CI736825.1|CI736825
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88311980|gb|CI580145.1|CI580145
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGGAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCCTCACCTCC
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCA-CCTCACCTCC
EST: gi|88730974|gb|CI754587.1|CI754587
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58676606|gb|CK065293.1|CK065293
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88410507|gb|CI686442.1|CI686442
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88331902|gb|CI642127.1|CI642127
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|86596787|gb|CI286700.1|CI286700
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|86849484|gb|CI299684.1|CI299684
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58675932|gb|CK064619.1|CK064619
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58678501|gb|CK067188.1|CK067188
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58679803|gb|CK068490.1|CK068490
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88350282|gb|CI623220.1|CI623220
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88361677|gb|CI680248.1|CI680248
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|33679189|gb|CF307428.1|CF307428
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TTTTTTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88300542|gb|CI587346.1|CI587346
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCAGCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|218482116|gb|FG962264.1|FG962264
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58603721|gb|CK014249.1|CK014249
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88357181|gb|CI616068.1|CI616068
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGGGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88729780|gb|CI753290.1|CI753290
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|218485779|gb|FG945165.1|FG945165
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88724306|gb|CI747565.1|CI747565
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88363127|gb|CI616284.1|CI616284
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88720961|gb|CI744260.1|CI744260
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|218485063|gb|FG949964.1|FG949964
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|33795951|gb|CF323843.1|CF323843
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88396672|gb|CI620005.1|CI620005
EST:     TCCCTCGGCTTCCTCCCGAGGAAG-GCTCCTCCCGCCACCGCGGCAAGTG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCC
genomic: TCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAG-Ggtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCC
EST: gi|58605935|gb|CK033968.1|CK033968
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88724217|gb|CI747476.1|CI747476
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58591646|gb|CF989954.1|CF989954
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|55434864|gb|CV730557.1|CV730557
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88315915|gb|CI618791.1|CI618791
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88312287|gb|CI582625.1|CI582625
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88408725|gb|CI686235.1|CI686235
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88420204|gb|CI621473.1|CI621473
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|33658130|gb|CF280744.1|CF280744
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGATTTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88363762|gb|CI609119.1|CI609119
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58593252|gb|CF991560.1|CF991560
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAA
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAA
EST: gi|29689626|gb|CB685901.1|CB685901
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88575550|gb|CI669695.1|CI669695
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88390011|gb|CI590524.1|CI590524
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGGGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|27554042|gb|CA997942.1|CA997942
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88424517|gb|CI608103.1|CI608103
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88852054|gb|CI683572.1|CI683572
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|218502819|gb|FG970328.1|FG970328
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58599474|gb|CK010002.1|CK010002
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88587703|gb|CI704415.1|CI704415
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|33686141|gb|CF314380.1|CF314380
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|218494740|gb|FG970602.1|FG970602
EST:     ATCCCTCTGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|33793265|gb|CF322513.1|CF322513
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88725321|gb|CI748580.1|CI748580
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTNAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88428415|gb|CI564883.1|CI564883
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88316005|gb|CI618881.1|CI618881
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88589467|gb|CI707348.1|CI707348
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|86832037|gb|CI305263.1|CI305263
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88579072|gb|CI688040.1|CI688040
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|218504866|gb|FG963484.1|FG963484
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88396779|gb|CI620112.1|CI620112
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|58677595|gb|CK066282.1|CK066282
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88330561|gb|CI635185.1|CI635185
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGANGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88720670|gb|CI743969.1|CI743969
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88366504|gb|CI610649.1|CI610649
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88307327|gb|CI641966.1|CI641966
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|86901693|gb|CI310455.1|CI310455
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTNCA-CAAACCATGCCACCTCACCTCC
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGT-CAACAAACCATGCCACCTCACCTCC
EST: gi|88351287|gb|CI623509.1|CI623509
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|88724529|gb|CI747788.1|CI747788
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
EST: gi|218483702|gb|FG965932.1|FG965932
EST:     ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGG                         TGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT
genomic: ATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 71 (upstream exon), 74 (downstream exon)
Score: 46

AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcac ... gttattgcagTGAAGTCATTCCCCAAGGATGACGTCAACAAACCATGCCACCTCACCTCCTTTGTCGGTTACAAGGCTGGAATGACCCACATTGTGCGTGAGGTCGAGAA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGGAGGAGTAAGAAGATGTCGCACAGGAAGTTCGAGCACCCGAGGCACGGATCCCTCGGCTTCCTCCCGAGGAAGCGCTCCTCCCGCCACCGCGGCAAGGgtatgctcactcacctactctctctctctctctcttttgcttgtgcggtgctgtatttgtagagcttgcgccttgtatggtagagtagaaacttgttgga

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTCCTC
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