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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATAACGCTGGAACAAACAAGGCGGCGTCCAGTGGCACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatcttcaagcccgtatcatcttatttgttaactactaataatctttttggttgcgacttgcgagcttatttatcctaaaagttatacgaccat...

Basic information

species Oryza sativa
transcript LOC_Os08g27850.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os08g27850.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM5G800112_T02 (Zea mays), 5'ss of exon 2
ATAACGCTGGAACAAACAAGGCGGCGTCCAGTGGCACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatcttcaagcccgtatcatcttatttgttaactactaataatctttttggttgcgacttgcgagcttatttatcctaaaagttatacgaccat-
| |||||||| || ||||||||||| ||||| || |||||||||||||||||||| || || ||||||||||| | ||| |||||||||  |||  |   | |||| ||| |    |   || |||    |  ||| || | |  |  |  |||    ||  ||      | || ||        
ACAACGCTGGTACGAACAAGGCGGCATCCAGCGGTACATCCCTCAACACCAAGCGCCTCGACGACGACACCGAAAACCTCGCCCgtgagcaatcagctgtctcgtaccatttctcataacaattacatcgatgcttgtttgcttaggatc-cgaatacataaatttgggcacttgtaaaggtgga

upper sequence: LOC_Os08g27850.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G101480_T01 (Zea mays), 5'ss of exon 2
ATAACGCTGGAACAAACAAGGCGGCGTCCAGTGGCACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatcttcaagcccgtatcatcttatttgttaacta-ctaataatctttttggttgcgacttgcgagcttatttatcctaaaagttatacgaccat
  |||||||| |  ||||||||||||||||| ||||||||||||||||||||||| || || |||||||| |||| ||| |||||||||  ||| ||   | ||   ||| ||     | ||| | || ||   | ||||  ||| | || |    |  ||  ||       |  |   | ||| 
TCAACGCTGGTATGAACAAGGCGGCGTCCAGCGGCACATCCCTCAACACCAAGCGCCTCGACGACGACACAGAGAACCTCGCCCgtgagcaatcatctgtctcgggccatttttcccatgaacaatctgatcgacgttttt-ttgtgcctaggatcccaatagataaattcgggcacttgtccac
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86601227|gb|CI251601.1|CI251601
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|11610342|gb|AU166018.1|AU166018
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88237168|gb|CI237017.1|CI237017
EST:     CACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|89198956|gb|CI253030.1|CI253030
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|11565080|gb|AU165716.1|AU165716
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|38472253|gb|CF956384.1|CF956384
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|55411622|gb|CV723998.1|CV723998
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGAC-TGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|55409251|gb|CV721627.1|CV721627
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88979681|gb|CI026041.1|CI026041
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88242741|gb|CI242590.1|CI242590
EST:     CGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86417751|gb|CI031960.1|CI031960
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86254981|gb|CI017101.1|CI017101
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88992120|gb|CI035258.1|CI035258
EST:     CAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|87013409|gb|CI267110.1|CI267110
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86602450|gb|CI264778.1|CI264778
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88201728|gb|CI202083.1|CI202083
EST:     CACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|218496704|gb|FG954265.1|FG954265
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88241200|gb|CI241049.1|CI241049
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88987644|gb|CI034519.1|CI034519
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|3762512|gb|AU029264.1|AU029264
EST:     CACATCCCTCAACACCAAGCGGNTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86415763|gb|CI029774.1|CI029774
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|87026778|gb|CI254884.1|CI254884
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88975886|gb|CI024137.1|CI024137
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86524021|gb|CI164227.1|CI164227
EST:     CCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|33814533|gb|CF333131.1|CF333131
EST:     CATCCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTG
genomic: CAT-CCCTCAACACCAAGCGGCTGGATGACGACACCGAGAG-CCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTG
EST: gi|86539559|gb|CI179765.1|CI179765
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|58692614|gb|CK081301.1|CK081301
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86522349|gb|CI162555.1|CI162555
EST:     ACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: ACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88238695|gb|CI238544.1|CI238544
EST:     CACATCCCTCAACACCAGGCGGCTGGATGACGACACGGAGAGCCTTGCCC                         ATGAGCGTGTTTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88242845|gb|CI240696.1|CI240696
EST:     CACATCCCTCAACACCAGGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTTTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|87013308|gb|CI265406.1|CI265406
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88360673|gb|CI647683.1|CI647683
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|15850958|gb|BI799234.1|BI799234
EST:     ACACCCCTCAACACCAAGCGGCTGGATGACGACACCCGAGA-CCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAACCCTCATGCAAGCAAGGCTGG
genomic: ACATCCCTCAACACCAAGCGGCTGGATGACGACA-CCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88205820|gb|CI205669.1|CI205669
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|87031663|gb|CI264036.1|CI264036
EST:     CACATCCCTCAACACCAAGCAGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86853994|gb|CI251985.1|CI251985
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88237428|gb|CI237277.1|CI237277
EST:     CACATCCCTCAACACCAAGCGGCTGGAGGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88204251|gb|CI204100.1|CI204100
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86416398|gb|CI030409.1|CI030409
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|58692057|gb|CK080744.1|CK080744
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|38476402|gb|CF960535.1|CF960535
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|218502357|gb|FG954996.1|FG954996
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88237841|gb|CI237690.1|CI237690
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88240325|gb|CI239487.1|CI239487
EST:     GGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: GGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88848006|gb|CI086528.1|CI086528
EST:     GCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: GCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86599388|gb|CI251346.1|CI251346
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88202154|gb|CI202509.1|CI202509
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|89170253|gb|CI039530.1|CI039530
EST:     AGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: AGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|58588661|gb|CF986969.1|CF986969
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88981494|gb|CI027112.1|CI027112
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|38478589|gb|CF962722.1|CF962722
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88213037|gb|CI212701.1|CI212701
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88994862|gb|CI036443.1|CI036443
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88991546|gb|CI019724.1|CI019724
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86890257|gb|CI321434.1|CI321434
EST:     AGCGGCTGGATGACGACACCGAGAGCC-TGCCC                         ATGAGCGTGTCTCAATTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: AGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88242726|gb|CI242575.1|CI242575
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88335059|gb|CI641868.1|CI641868
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|30229491|gb|CB967382.1|CB967382
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88242483|gb|CI242332.1|CI242332
EST:     CGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGATAAACCTCATGCAAGCAAGGCTGG
genomic: CGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88209992|gb|CI209841.1|CI209841
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88841908|gb|CI081164.1|CI081164
EST:     CCGAGAGCCATGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86418447|gb|CI032656.1|CI032656
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|58687686|gb|CK076373.1|CK076373
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88241499|gb|CI241348.1|CI241348
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|38475393|gb|CF959526.1|CF959526
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|8856692|gb|AU094010.1|AU094010
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88991931|gb|CI035069.1|CI035069
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|163922997|gb|EG712770.1|EG712770
EST:     GGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: GGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|58598992|gb|CK009520.1|CK009520
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCC-TGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86512576|gb|CI155209.1|CI155209
EST:     CGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAGAAACCTCATGCAAGCAAGGCTGG
genomic: CGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88850668|gb|CI094933.1|CI094933
EST:     CAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|89171977|gb|CI040487.1|CI040487
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|55415485|gb|CV727861.1|CV727861
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|87029255|gb|CI276523.1|CI276523
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86824459|gb|CI262974.1|CI262974
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|87019575|gb|CI282076.1|CI282076
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|89172894|gb|CI040787.1|CI040787
EST:     CGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGATGAACCTCATGCAAGCAAGGCTGG
genomic: CGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86527466|gb|CI167672.1|CI167672
EST:     GGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: GGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88204908|gb|CI202759.1|CI202759
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88250894|gb|CI248745.1|CI248745
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|218494429|gb|FG953432.1|FG953432
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86601787|gb|CI256292.1|CI256292
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86525860|gb|CI166066.1|CI166066
EST:     AGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGATAAACCTCATGCAAGCAAGGCTGG
genomic: AGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88241516|gb|CI241365.1|CI241365
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88307263|gb|CI641900.1|CI641900
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|87013313|gb|CI265411.1|CI265411
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86507667|gb|CI150300.1|CI150300
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86899405|gb|CI298192.1|CI298192
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGC
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGC
EST: gi|88244198|gb|CI243320.1|CI243320
EST:     TGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: TGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88207231|gb|CI207080.1|CI207080
EST:     ACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: ACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|58681229|gb|CK069916.1|CK069916
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88995421|gb|CI036996.1|CI036996
EST:     AGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: AGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88982305|gb|CI027880.1|CI027880
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88995924|gb|CI037215.1|CI037215
EST:     CGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|86536879|gb|CI177085.1|CI177085
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGTCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|38479916|gb|CF964005.1|CF964005
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|569968|gb|D40817.1|D40817
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATNAGCGTNTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGAAAGGTTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88339187|gb|CI633758.1|CI633758
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88326492|gb|CI659926.1|CI659926
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88208040|gb|CI207889.1|CI207889
EST:     CAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|88240058|gb|CI239220.1|CI239220
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
EST: gi|218496227|gb|FG950094.1|FG950094
EST:     CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCC                         ATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG
genomic: CACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 74 (upstream exon), 75 (downstream exon)
Score: 252

ATAACGCTGGAACAAACAAGGCGGCGTCCAGTGGCACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatc ... catatgctagATGAGCGTGTCTCAAGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGGACAAGAAGATGACCCAGGCACAGCTTGCACAG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATAACGCTGGAACAAACAAGGCGGCGTCCAGTGGCACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCgtgagtcatcttcaagcccgtatcatcttatttgttaactactaataatctttttggttgcgacttgcgagcttatttatcctaaaagttatacgaccat

- - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGGA