Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTAAGGGCGCGGAGAAGCCCGCCGCCAAGGGCAGGAAGGGGAAGGCCGGCAAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccacttccccgattttcttctgccttcttttttttttttggaggggattttcgtttgatcttgtttcgctcag

Basic information

species Oryza sativa
transcript LOC_Os06g51220.4
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os06g51220.4 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G150348_T01 (Zea mays), 5'ss of exon 2
---GTAAGGGCGCGGAGAAGCCCGCCGCCAAGGGCAGGAAGGGGAAGGCCGGCAAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccacttccccgattttcttctgccttcttttttttttttggag-------gggattttcgtttgatcttgtttcgctcag-----------
   | ||||| || ||||||||  ||   ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||| || || ||||  |||  |    |   || | |   |||| ||  |||||||| |           | ||| || || ||| ||||||   |  |           
AGAGCAAGGGAGCAGAGAAGCCGACC---AAGGGTAGGAAGGCGAAGGCCGGCAAGGACCCCAACAAGCCCAAGAGGGCTCCCAATGCTTTCTTTGTGTTAATgtgtgacgtcagttctatttgtatctcgcctcctccttttttttggagatatttctagcattgtcattcgat-ttgtttgtttttgtctctatgcag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58599231|gb|CK009759.1|CK009759
EST:     AAGGACCCCAACAAGCCCAAGAGGGCGGGCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33658543|gb|CF281156.1|CF281156
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAANGAATAAATCTG
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAA-GAATAAATCTG
EST: gi|33662550|gb|CF293517.1|CF293517
EST:     GACCCCCAACCAAGCCCAAGAGGGCTCCCTCCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCCAAAGAATAAATCT
genomic: GA-CCCCAA-CAAGCCCAAGAGGGCTCCCT-CCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAA-CCCC-AAGAATAAATCT
EST: gi|29621857|gb|CB626868.1|CB626868
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29679537|gb|CB675812.1|CB675812
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58594868|gb|CF993176.1|CF993176
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTGGTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58695034|gb|CK083721.1|CK083721
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33662445|gb|CF293412.1|CF293412
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29621856|gb|CB626867.1|CB626867
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58676420|gb|CK065107.1|CK065107
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|218487272|gb|FG955013.1|FG955013
EST:     GAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: GAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29628654|gb|CB633665.1|CB633665
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29669077|gb|CB665352.1|CB665352
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29665838|gb|CB662113.1|CB662113
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTGTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58694106|gb|CK082793.1|CK082793
EST:     CCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: CCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58585904|gb|CF984212.1|CF984212
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTGCGAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|38471569|gb|CF955700.1|CF955700
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|38471558|gb|CF955689.1|CF955689
EST:     CAACAAGCCCAAGAGGGCTCGCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: CAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33663483|gb|CF294450.1|CF294450
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58593325|gb|CF991633.1|CF991633
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29664374|gb|CB660649.1|CB660649
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|3763596|gb|AU030348.1|AU030348
EST:     AA-GACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29659923|gb|CB656198.1|CB656198
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33659807|gb|CF282420.1|CF282420
EST:     AAGGCCCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58691720|gb|CK080407.1|CK080407
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|396941641|gb|HO188298.1|HO188298
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|218502608|gb|FG949724.1|FG949724
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29665805|gb|CB662080.1|CB662080
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29677199|gb|CB673474.1|CB673474
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33662123|gb|CF293090.1|CF293090
EST:     GCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGGAATAAATCTG
genomic: GCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAA-GAATAAATCTG
EST: gi|8856885|gb|AU094203.1|AU094203
EST:     GGACCCCAACCAAGCCCAAGAGGGCTCCNTCCGCTTTTCTTCGTTTTTAT                         GNAGAAGTNCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: GGACCCCAA-CAAGCCCAAGAGGGCTCCCTCCGC-TTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|8324559|gb|AU091705.1|AU091705
EST:     TCCGCTTTCTTCGTTTTTAT                         GNAGAAGTTCCGTAAGGAGTTCAAGNAGAAGAACCCCAAGAATAAATCTGT
genomic: TCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29622248|gb|CB627259.1|CB627259
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58670107|gb|CK058793.1|CK058793
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29687336|gb|CB683611.1|CB683611
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33663024|gb|CF293991.1|CF293991
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTGT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|218478171|gb|FG953526.1|FG953526
EST:     CCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAG-TCCGTAAGGAG-TCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: CCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|218484731|gb|FG957762.1|FG957762
EST:     TTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: TTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|218481785|gb|FG954752.1|FG954752
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58661396|gb|CK050076.1|CK050076
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58603044|gb|CK013572.1|CK013572
EST:     AGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29688794|gb|CB685069.1|CB685069
EST:     CCAAGAGGGGCTCCCTCCGCTTTGTTCGTTTTTAT                         G
genomic: CCAAGA-GGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcag-
EST: gi|29688794|gb|CB685069.1|CB685069
EST:     CCAAGAGGGGCTCCCTCCGCTTTGTTCGTTTTTAT                         G
genomic: CCAAGA-GGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcag-
EST: gi|218481324|gb|FG953308.1|FG953308
EST:     CAAGCCCAAGAAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: CAAGCCCAAG-AGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|325493080|gb|JG457604.1|JG457604
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAG-AGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58675709|gb|CK064396.1|CK064396
EST:     AAGGACCCCAACAAGGCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58598470|gb|CK008998.1|CK008998
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCGGGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|218484316|gb|FG953183.1|FG953183
EST:     AATGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAATGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|38482972|gb|CF966774.1|CF966774
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|163928359|gb|EG712615.1|EG712615
EST:     GAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: GAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58587767|gb|CF986075.1|CF986075
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29684412|gb|CB680687.1|CB680687
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58696070|gb|CK084757.1|CK084757
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|24208834|gb|AU225861.1|AU225861
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|218491482|gb|FG956067.1|FG956067
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58692800|gb|CK081487.1|CK081487
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58668756|gb|CK057442.1|CK057442
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58680807|gb|CK069494.1|CK069494
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTGCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58695392|gb|CK084079.1|CK084079
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|55408763|gb|CV721139.1|CV721139
EST:     CCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: CCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|55409649|gb|CV722025.1|CV722025
EST:     CCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: CCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58592413|gb|CF990721.1|CF990721
EST:     GAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29686955|gb|CB683230.1|CB683230
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33662765|gb|CF293732.1|CF293732
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|55408446|gb|CV720822.1|CV720822
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29688722|gb|CB684997.1|CB684997
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33658795|gb|CF281408.1|CF281408
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29641324|gb|CB646331.1|CB646331
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58695053|gb|CK083740.1|CK083740
EST:     ACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: ACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58691858|gb|CK080545.1|CK080545
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58696190|gb|CK084877.1|CK084877
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33666490|gb|CF297457.1|CF297457
EST:     GCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCCAAGAATAAATCTG
genomic: GCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAA-CCCCAAGAATAAATCTG
EST: gi|33655093|gb|CF277707.1|CF277707
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29624320|gb|CB629331.1|CB629331
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33666115|gb|CF297082.1|CF297082
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29669076|gb|CB665351.1|CB665351
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58688692|gb|CK077379.1|CK077379
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58692927|gb|CK081614.1|CK081614
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58686620|gb|CK075307.1|CK075307
EST:     TTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: TTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|38474110|gb|CF958242.1|CF958242
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29643663|gb|CB648670.1|CB648670
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29624433|gb|CB629444.1|CB629444
EST:     CCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: CCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|86601618|gb|CI256123.1|CI256123
EST:     AAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|4716467|gb|AU057583.1|AU057583
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|5803376|gb|AI978324.1|AI978324
EST:     AAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33665955|gb|CF296922.1|CF296922
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAGATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29671952|gb|CB668227.1|CB668227
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29687600|gb|CB683875.1|CB683875
EST:     AGGACCCCAACAGAGCCCTAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AGGACCCCAACA-AGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33797980|gb|CF324850.1|CF324850
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58675087|gb|CK063774.1|CK063774
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29688721|gb|CB684996.1|CB684996
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29670694|gb|CB666969.1|CB666969
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33653508|gb|CF276122.1|CF276122
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29665837|gb|CB662112.1|CB662112
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|218499011|gb|FG954723.1|FG954723
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTC-AGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29679536|gb|CB675811.1|CB675811
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|218497459|gb|FG955185.1|FG955185
EST:     AAGGACCCCATCAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|29665806|gb|CB662081.1|CB662081
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58688956|gb|CK077643.1|CK077643
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|58600330|gb|CK010858.1|CK010858
EST:     CCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: CCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33655238|gb|CF277852.1|CF277852
EST:     GCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCCAAAGAATAAATCT
genomic: GCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAA-CCCC-AAGAATAAATCT
EST: gi|38481706|gb|CF965788.1|CF965788
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
EST: gi|33664669|gb|CF295636.1|CF295636
EST:     AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTAT                         GGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT
genomic: AAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 58 (downstream exon)
Score: 843

GTAAGGGCGCGGAGAAGCCCGCCGCCAAGGGCAGGAAGGGGAAGGCCGGCAAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccac ... tttcgctcagGGAGGAGTTCCGTAAGGAGTTCAAGGAGAAGAACCCCAAGAATAAATCTGTCGCTGCT




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTAAGGGCGCGGAGAAGCCCGCCGCCAAGGGCAGGAAGGGGAAGGCCGGCAAGGACCCCAACAAGCCCAAGAGGGCTCCCTCCGCTTTCTTCGTTTTTATgtcagaccacttccccgattttcttctgccttcttttttttttttggaggggattttcgtttgatcttgtttcgctcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG