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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGTACTACGATAGCTCGCCGCAGCTTTCGTTCAAGCATGTTTACACCCGTCGAGCGGTGGTTCCTGGTTCGATTATAGTCGATGgtatgatcctcttcgacattcatattgtgaatctttgtgtatgctttaaaataaccattaaccgatgctttggttaataatagtagacactggatagtag...

Basic information

species Oryza sativa
transcript LOC_Os04g57210.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os04g57210.2 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G043862_T01 (Zea mays), 5'ss of exon 2
GCTGTACTACGATAGCTCGCCGCAGCTTTCGTTCAAGCATGTTTACACCCGTCGAGCGGTGGTTCCTGGTTCGATTATAGTCGATGgtatgatcctctt-cgacattcatattgtgaatctttgtgtatgctttaaaataaccattaaccgat-gctttggttaataatagtagacactggatagtag
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GCTGTACTACGATAGCTCGCCGCAGCTCTCGTTCAAACAGATTTACGGCCTCCGAGCGCTGGTCCCGGGTACTCTCATCGTGGATGgtaagagattagcataaccctgacacttccaat-tttactttcgatttaga-tgcccagcgcttgctcgatcaaaacaaatattcaggaaactattgagtga