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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttagatctgtctccctcaccctggttgttgctgatacgcctgtgctgatgtgtggatatgagttcagttcctgagttactcttgggctgcatagt...

Basic information

species Oryza sativa
transcript LOC_Os04g43540.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os04g43540.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G028883_T01 (Zea mays), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga---tctgtctccctcaccctggttgttgc---tgatacgcctgtgctgatgtgtggatatgagttcagttcctg--agttactcttgggctgcatagt
||||||||||||||||||||||||||| |||||||| || |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||| | |   || |    | || | || || ||  |   || | ||| |  ||||| |||| ||||   |    ||    |     || || |   |        
GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaaatgtcagatcacttctctcttgtggtctcctttggttcgctttagctgaggtgttgataccggcctggtgttggctgcgtattcataaac--------

upper sequence: LOC_Os04g43540.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GLYMA20G35000.1 (Glycine max), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttagatctgtctccc------tcaccctggttgttgctgatacgcctgtgctgatgtgtggatatgagttcagttcctgagttactcttgggctgcatagt-----
 |||||||||| ||| ||||||||| |||| ||||   | |||||||||||||| || ||| | ||||||||||||||||| ||| | ||||||||||| || | |     |   | |||      | ||| |  ||     | |  | |      |    |||     |    | ||||| ||  ||  |  |   |   ||| |     
TTTCAAGAGGTACGTTGAGATCGGGAGGGTTGCCCAAATCAACTACGGCAAGGAATATGGCAGGCTCGTCGTCATTGTCGACGTCATTGACCAGAACAGAgtaactccccaccaccacccaagttcttacctttattcacatttacgcacacccatttgcatgttttcttagaattagttcttgctttgttgataatcctaataatattag

upper sequence: LOC_Os04g43540.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GLYMA10G32580.1 (Glycine max), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttag-----atctgtctccctcaccctggttgttgctga-tacgcctgtgctgatgtgtggatatgagttcagttcctgagttactcttgggctgcatagt
 |||||||||| ||| ||||||||| |||| || |   | |||||||||||||| || ||| | ||||||||||| ||||| ||| | ||||||||||| || |          | |    | | |  |  || |      | |  |  ||  |    |||| |   ||  |||     |  |  |||  |  ||      |||| 
TTTCAAGAGGTACGTTGAGATCGGGAGGGTTGCTCAAATCAACTACGGCAAGGAATATGGCAGGCTCGTCGTCATCGTCGACGTCATTGACCAGAACAGAgtaacccctccaccacccaatttcttacctttgatcacatttaagcatacccatttgcatgttttcttagaagtagttgttttttgttgttgatgataataatag-

upper sequence: LOC_Os04g43540.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GLYMA03G06380.1 (Glycine max), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttagat-ctgtctccc------tcaccctggttgttgctgatacgcctgtgctgatgtgtggatatgagttcagttcctgagttactcttgggctgcatagt-----
 ||||||||||  || ||||| ||| ||||  |||   | |||||||||||||| || ||| | ||||||||||||||||||||| | ||||||||||| || | |      |   | |||      | ||| |  ||     | | || |      |    ||      |    | ||||| ||  ||  |  |   |   ||| |     
TTTCAAGAGGTATGTTGAGATTGGGAGGGTTTCCCAAATCAACTACGGCAAGGAATATGGCAGGCTCGTCGTCATTGTCGATGTCATTGACCAGAACAGAgtaactctcccaccaccacccaagttcttacctttattcacatttacacacaaccatttgcatgctttcttagaattagttcttgctttgttgataatcctaataatattag

upper sequence: LOC_Os04g43540.1 (Oryza sativa), 5'ss of exon 2
lower sequence: Vv05s0049g01310.t01 (Vitis vinifera), 5'ss of exon 3
GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttagatctgtctccctcaccctggttgttgctgatacgcctg-tgctgatgt--gtggatatgagttcagttcctgagttact--cttgggctgcatagt
 |||||| ||| ||||||| ||||||| || || || || |||||||| || ||||||||| | ||||||||||| ||||| ||| | || |||||  ||||  ||    | | |||   |||   |  ||| |  |  |  |  || ||   | ||  |||  |||  |   | |    | |||  |   ||  | ||  |   
TTTCAAGCGGTACGTGGAGGTCGGGCGAGTCGCTCTCGTCAACTACGGAAAAGACTACGGCAGGCTCGTCGTCATAGTCGACGTCATTGATCAGAATCGGgtatgt---gtttttctttttcattttatttgctctttgtttggttgctgggaaagttggtgagtatcggagaaatctaagggtttatgttttctgttgtttc--

upper sequence: LOC_Os04g43540.1 (Oryza sativa), 5'ss of exon 2
lower sequence: Vv11s0118g00670.t01 (Vitis vinifera), 5'ss of exon 3
GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagt-tagatctgtctcc-ctcaccctggttgttgctgatacgcctgtgctgatgtgtggata-tgagttcagttcctgagttactcttgggctgcatagt
 |||||| ||| ||||||||||||||| || || || || ||||||||||| || |||||| | ||||||||||| ||||||||| | || |||||  ||||  || |  || ||| |   ||     |  |  |  | | |           | | | |    |  ||||   | | |||    ||       ||  ||   
TTTCAAGCGGTACGTGGAGATCGGGCGAGTCGCTCTCGTCAACTACGGCAAAGAATACGGCAGGCTCGTCGTCATAGTCGATGTCATTGATCAGAATCGGgtatgtgtgaatgtgtgtgtgcttgatttcatcctctcggttgttttctaagagttatctcagcaacgagtagtggttctgga--acggaaaaccttaattt-

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88210826|gb|CI209102.1|CI209102
EST:     CTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: CTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87030635|gb|CI255064.1|CI255064
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88209122|gb|CI208971.1|CI208971
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88983064|gb|CI020628.1|CI020628
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87025238|gb|CI265803.1|CI265803
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88237517|gb|CI237366.1|CI237366
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88240006|gb|CI239168.1|CI239168
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86592719|gb|CI268384.1|CI268384
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87025574|gb|CI254620.1|CI254620
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86421857|gb|CI059430.1|CI059430
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87024896|gb|CI261405.1|CI261405
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88848457|gb|CI086979.1|CI086979
EST:     GTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86423532|gb|CI062293.1|CI062293
EST:     TCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: TCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88502052|gb|CI429558.1|CI429558
EST:     CGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: CGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86424760|gb|CI063521.1|CI063521
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86254181|gb|CI058908.1|CI058908
EST:     TCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: TCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88507954|gb|CI435460.1|CI435460
EST:     CGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: CGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|33659746|gb|CF282359.1|CF282359
EST:     GTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86503228|gb|CI145861.1|CI145861
EST:     CGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: CGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86530176|gb|CI170382.1|CI170382
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86532570|gb|CI172776.1|CI172776
EST:     AGGACTACGGCCGCCTCGTCGTCATCGTCGAGGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88243822|gb|CI242944.1|CI242944
EST:     GTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86529469|gb|CI169675.1|CI169675
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88207792|gb|CI207641.1|CI207641
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87018756|gb|CI254464.1|CI254464
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|33693018|gb|CF321257.1|CF321257
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88956025|gb|CI092313.1|CI092313
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86534018|gb|CI174224.1|CI174224
EST:     GCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88244445|gb|CI243567.1|CI243567
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86417114|gb|CI031323.1|CI031323
EST:     CGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: CGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87024000|gb|CI254564.1|CI254564
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86530083|gb|CI170289.1|CI170289
EST:     GTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88988216|gb|CI036186.1|CI036186
EST:     ACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: ACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88762311|gb|CI771867.1|CI771867
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|33660522|gb|CF291489.1|CF291489
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88299824|gb|CI577326.1|CI577326
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88212240|gb|CI211880.1|CI211880
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87026368|gb|CI280279.1|CI280279
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88241585|gb|CI241434.1|CI241434
EST:     TTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: TTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87013278|gb|CI265376.1|CI265376
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88240733|gb|CI239895.1|CI239895
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88208367|gb|CI208216.1|CI208216
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86529924|gb|CI170130.1|CI170130
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86596586|gb|CI284897.1|CI284897
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86855118|gb|CI263185.1|CI263185
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86529675|gb|CI169881.1|CI169881
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88222293|gb|CI222249.1|CI222249
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88242204|gb|CI242053.1|CI242053
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACCTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|33660366|gb|CF291333.1|CF291333
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86601126|gb|CI356883.1|CI356883
EST:     TCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: TCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87026740|gb|CI254846.1|CI254846
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87028490|gb|CI263832.1|CI263832
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88207002|gb|CI206851.1|CI206851
EST:     GTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86530994|gb|CI171200.1|CI171200
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86602544|gb|CI264872.1|CI264872
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88983112|gb|CI020676.1|CI020676
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88210758|gb|CI210607.1|CI210607
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87032416|gb|CI264197.1|CI264197
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87020224|gb|CI261088.1|CI261088
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87020644|gb|CI267365.1|CI267365
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86829268|gb|CI284944.1|CI284944
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87031401|gb|CI261775.1|CI261775
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86414007|gb|CI068214.1|CI068214
EST:     GTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|33671190|gb|CF299429.1|CF299429
EST:     AGGACTACGGCCGCTTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88239493|gb|CI239970.1|CI239970
EST:     GTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86546509|gb|CI186715.1|CI186715
EST:     TCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: TCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88690021|gb|CI734100.1|CI734100
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|33814650|gb|CF333189.1|CF333189
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87007642|gb|CI281106.1|CI281106
EST:     TCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: TCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86905295|gb|CI283259.1|CI283259
EST:     GATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87014726|gb|CI269433.1|CI269433
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88962750|gb|CI023850.1|CI023850
EST:     CCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: CCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86423050|gb|CI060623.1|CI060623
EST:     TCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: TCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87028661|gb|CI266060.1|CI266060
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88212103|gb|CI211743.1|CI211743
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88207393|gb|CI207242.1|CI207242
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGAAGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|44671055|gb|CR284489.1|CR284489
EST:     AGGACTACGTCCTCCTTGTCGTCATTTTTGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88836336|gb|CI078233.1|CI078233
EST:     AGGACTACGGCCGCCTCGTCGTCATNGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88849400|gb|CI089308.1|CI089308
EST:     GTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: GTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88207305|gb|CI207154.1|CI207154
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|89165096|gb|CI255153.1|CI255153
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|89186391|gb|CI262223.1|CI262223
EST:     CGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTGCGCTGCCAGATAAACTTCAAGCGG
genomic: CGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86532369|gb|CI172575.1|CI172575
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86423195|gb|CI060768.1|CI060768
EST:     CATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: CATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|10930806|gb|AU161080.1|AU161080
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88829174|gb|CI074044.1|CI074044
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGCCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|55441414|gb|CV734026.1|CV734026
EST:     AGGACTACGGCCGCCTTGTTGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86846533|gb|CI280853.1|CI280853
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86531683|gb|CI171889.1|CI171889
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86539537|gb|CI179743.1|CI179743
EST:     TCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: TCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|88241098|gb|CI240947.1|CI240947
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86256531|gb|CI061294.1|CI061294
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86533194|gb|CI173400.1|CI173400
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|33656637|gb|CF279251.1|CF279251
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86595450|gb|CI264547.1|CI264547
EST:     ACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: ACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87018667|gb|CI254375.1|CI254375
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|87010380|gb|CI281270.1|CI281270
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
EST: gi|86251101|gb|CI055234.1|CI055234
EST:     AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGG                         GCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG
genomic: AGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 71 (upstream exon), 74 (downstream exon)
Score: 236

GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga ... gtgatttcagGCACTTGTGGATGCCCCTGATATGGTCCGCTGCCAGATAAACTTCAAGCGGCTTTCTCTGACTGACATTAAGATTGACATCAAGCGTGTCCCTAAGAAGA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttagatctgtctccctcaccctggttgttgctgatacgcctgtgctgatgtgtggatatgagttcagttcctgagttactcttgggctgcatagt

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gggctgc