1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctctctctctctctctctctcttgactatgtgttccgttgctcgttggtgtctgtggtttgttcattcgttttttttttattattattttgtttgtgtgttggatgcag
species | Oryza sativa |
transcript | LOC_Os03g52840.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCGTCCCTGCCGGGGACGGAGGAGAGATCCGGAGTCACC TGCCCGAAGCAGTTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58612638|gb|CK040350.1|CK040350
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29675547|gb|CB671822.1|CB671822
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: CCGGAGTCACC TGGCCTTAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88403169|gb|CI570910.1|CI570910
genomic: CCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88424270|gb|CI581825.1|CI581825
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29615988|gb|CB621000.1|CB621000
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29624282|gb|CB629293.1|CB629293
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GAGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58592438|gb|CF990746.1|CF990746
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCGCGAGATCGCCEST: gi|58612303|gb|CK040015.1|CK040015
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29614138|gb|CB619151.1|CB619151
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29636379|gb|CB641388.1|CB641388
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29619822|gb|CB624834.1|CB624834
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29638078|gb|CB643087.1|CB643087
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88344989|gb|CI625835.1|CI625835
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGATGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58610782|gb|CK038494.1|CK038494
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58610008|gb|CK038041.1|CK038041
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29621132|gb|CB626143.1|CB626143
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29641599|gb|CB646606.1|CB646606
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58609425|gb|CK037458.1|CK037458
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88426571|gb|CI579400.1|CI579400
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58613274|gb|CK040986.1|CK040986
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|117244508|gb|CT848411.1|CT848411
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29614628|gb|CB619641.1|CB619641
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29670801|gb|CB667076.1|CB667076
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58665373|gb|CK054059.1|CK054059
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGACCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGGCEST: gi|29646105|gb|CB651112.1|CB651112
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58657072|gb|CK045752.1|CK045752
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88428580|gb|CI565048.1|CI565048
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29618931|gb|CB623943.1|CB623943
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TAGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGCGGATCCCGAGATCGCEST: gi|29618036|gb|CB623048.1|CB623048
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagT-GGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29667991|gb|CB664266.1|CB664266
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29633899|gb|CB638908.1|CB638908
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29634685|gb|CB639694.1|CB639694
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGACATATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29615274|gb|CB620286.1|CB620286
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88734102|gb|CI757610.1|CI757610
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29635394|gb|CB640403.1|CB640403
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29634586|gb|CB639595.1|CB639595
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29646445|gb|CB651452.1|CB651452
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58611875|gb|CK039587.1|CK039587
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58605862|gb|CK033895.1|CK033895
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29621678|gb|CB626689.1|CB626689
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58605171|gb|CK033204.1|CK033204
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88447579|gb|CI584583.1|CI584583
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGAGGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29634602|gb|CB639611.1|CB639611
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29678030|gb|CB674305.1|CB674305
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58695121|gb|CK083808.1|CK083808
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: CCCTGCCGGCGACGGAGGAGAGAT-CGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|33674867|gb|CF303106.1|CF303106
genomic: CCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88406273|gb|CI596400.1|CI596400
genomic: GACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29622694|gb|CB627705.1|CB627705
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58613051|gb|CK040763.1|CK040763
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGGCEST: gi|88397959|gb|CI583277.1|CI583277
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGAGGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29665918|gb|CB662193.1|CB662193
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|38471328|gb|CF955459.1|CF955459
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58654507|gb|CK043187.1|CK043187
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCGEST: gi|29630142|gb|CB635151.1|CB635151
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88826721|gb|CI777286.1|CI777286
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58606494|gb|CK034527.1|CK034527
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29613481|gb|CB618494.1|CB618494
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88745591|gb|CI768951.1|CI768951
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGAAGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|87023586|gb|CI286337.1|CI286337
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58673445|gb|CK062131.1|CK062131
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88760569|gb|CI770125.1|CI770125
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88733450|gb|CI756627.1|CI756627
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|88398541|gb|CI595942.1|CI595942
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGT-CCTGCCGGCGACGGAGGAGAGATTCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|86901078|gb|CI306267.1|CI306267
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|58605751|gb|CK033784.1|CK033784
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29634567|gb|CB639576.1|CB639576
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCCEST: gi|29687893|gb|CB684168.1|CB684168
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
EST: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACC TGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
genomic: GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctc ... ttggatgcagTGGCCGAAGCAGCTGAACGCGCCGCTGGAGGAGGTGGATCCCGAGATCGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGTCCCTGCCGGCGACGGAGGAGAGATCCGGAGTCACCgtacgtgctctctctctctctctctctcttgactatgtgttccgttgctcgttggtgtctgtggtttgttcattcgttttttttttattattattttgtttgtgtgttggatgcag
- - - - - - - - GGAGGA
- - - - - - - - - GAGGAG
- - - - - - - - - AGGAGA
- - - - - - - - - - - GAGATC