Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88347693|gb|CI655046.1|CI655046EST: AATACAAGTCATTCCTTCACTGCTGGACTTGCTCATAGTGTAGGCTTAAG GAAGCAACCCCTGCGTGTGTACAGCATGGTGAAATATGCCGCA-TAGCACG
genomic: AATACAAGTCATTCCTTCACTGCTGGACTTGCTCATAGTGTAGGCTTAAGgtcagttctt ... tggattccagGAAGCAACCCCTGCGTGTGTACAGCATGGTGAAATATGCCGCAATAGCACG
EST:
gi|29677362|gb|CB673637.1|CB673637EST: ACTTGCTCATAGTGTAGGCTAAAG GAAGCAACCCCTGCGTGTGTACAGCATGGTGAAATATGCCGCAATAGCACG
genomic: ACTTGCTCATAGTGTAGGCTTAAGgtcagttctt ... tggattccagGAAGCAACCCCTGCGTGTGTACAGCATGGTGAAATATGCCGCAATAGCACG
EST:
gi|88335308|gb|CI650273.1|CI650273EST: AATACAAGTCATTCCTTCACTGCTGGACTTGCTCATAGTGTAGGCTTAAG GAAGCAACCCCTGCGTGTGTACAGCATGGTGAAATATGCCGCA-TAGCACG
genomic: AATACAAGTCATTCCTTCACTGCTGGACTTGCTCATAGTGTAGGCTTAAGgtcagttctt ... tggattccagGAAGCAACCCCTGCGTGTGTACAGCATGGTGAAATATGCCGCAATAGCACG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTGTTAGTGATCCAATCTCAGCAACATTCTGTGAACCCGTTGAGAAAGCTAATACAAGTCATTCCTTCACTGCTGGACTTGCTCATAGTGTAGGCTTAAGgtcagttcttgagtttaatgtctgcgcggtatgcataacctttatggatgctaatattgtgtaactacagccaaaactactctatacatttacatgccat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA