Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88825440|gb|CI776005.1|CI776005EST: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAG GCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
genomic: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAGgttgtctttc ... tgatgttcagGCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
EST:
gi|58593221|gb|CF991529.1|CF991529EST: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAG GCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
genomic: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAGgttgtctttc ... tgatgttcagGCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
EST:
gi|88739752|gb|CI763260.1|CI763260EST: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAG GCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
genomic: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAGgttgtctttc ... tgatgttcagGCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
EST:
gi|33808260|gb|CF330019.1|CF330019EST: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAG GCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
genomic: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAGgttgtctttc ... tgatgttcagGCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
EST:
gi|88740088|gb|CI763596.1|CI763596EST: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAG GCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
genomic: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAGgttgtctttc ... tgatgttcagGCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
EST:
gi|163926390|gb|EG712898.1|EG712898EST: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAG GCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
genomic: GTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAGgttgtctttc ... tgatgttcagGCATGAGACGTATGTAAATCAGTACCGTGCAATGTTCGTTCGCAACTGCAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCGATGAGCGGTGGGTGAGCAAGCAGAGGAAAGGGAGGACTTCTGACGCCGTGCTCAGCTGCCCCGCGTGCTTCACTACCTTGTGCCTGGATTGCCAGAGgttgtctttccttactgcttcgaactctgtgaggaggcttctggattccaatatgcatgtttattaagcagtcactagttctttttagattagtcgattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC