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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCTGAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgattcttgatctaacctcgtttgctcgtgttctttagttgatttagtggagaagcttggcatgatgcggtggggtgtagttttttttttttcat...

Basic information

species Oryza sativa
transcript LOC_Os02g12800.5
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88675649|gb|CI729762.1|CI729762
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88314792|gb|CI608251.1|CI608251
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGGGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88973473|gb|CI717901.1|CI717901
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88593431|gb|CI713385.1|CI713385
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88730660|gb|CI754273.1|CI754273
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88402796|gb|CI613244.1|CI613244
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88370462|gb|CI587852.1|CI587852
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88972508|gb|CI717248.1|CI717248
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88724690|gb|CI747949.1|CI747949
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88412219|gb|CI573495.1|CI573495
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88722148|gb|CI745658.1|CI745658
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88391242|gb|CI595496.1|CI595496
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88668271|gb|CI723010.1|CI723010
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGNGGNCCCGTCGAGATGGCGCTC                         GTATTGNATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88357098|gb|CI615985.1|CI615985
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88354432|gb|CI624822.1|CI624822
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88325783|gb|CI648228.1|CI648228
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88668076|gb|CI722815.1|CI722815
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88356851|gb|CI619337.1|CI619337
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88351346|gb|CI627362.1|CI627362
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88668759|gb|CI719716.1|CI719716
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88423688|gb|CI617040.1|CI617040
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGAT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGAT
EST: gi|88362359|gb|CI606549.1|CI606549
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88423568|gb|CI579280.1|CI579280
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88727710|gb|CI749512.1|CI749512
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88668655|gb|CI719612.1|CI719612
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88719721|gb|CI743231.1|CI743231
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88426801|gb|CI584164.1|CI584164
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88674113|gb|CI728226.1|CI728226
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88676535|gb|CI730648.1|CI730648
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|5667502|gb|AU077471.1|AU077471
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88673829|gb|CI727942.1|CI727942
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88391578|gb|CI600767.1|CI600767
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88359484|gb|CI621015.1|CI621015
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88668453|gb|CI722319.1|CI722319
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88357209|gb|CI616096.1|CI616096
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGGGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88677135|gb|CI731248.1|CI731248
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88422993|gb|CI615293.1|CI615293
EST:     GAAATCGAGTGAGTGGGAGCTAAGGGGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88677083|gb|CI731196.1|CI731196
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88362086|gb|CI607086.1|CI607086
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88668186|gb|CI722925.1|CI722925
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88314933|gb|CI609992.1|CI609992
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88392598|gb|CI625420.1|CI625420
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88665785|gb|CI715941.1|CI715941
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88397790|gb|CI583108.1|CI583108
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88904944|gb|CI712243.1|CI712243
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
EST: gi|88726584|gb|CI750239.1|CI750239
EST:     GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTC                         GTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT
genomic: GAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgatt ... attggtgtagGTATTGCATACTTTCGATGGAAACAAGAATGCATTCAAGGCACTCATTGCT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATCTGAAATCGAGTGAGTGGGAGCTAAGGCGGCGGCCCCGTCGAGATGGCGCTCgtaagtgattcttgatctaacctcgtttgctcgtgttctttagttgatttagtggagaagcttggcatgatgcggtggggtgtagttttttttttttcat

- - - - - - - - -  GGAGCT
- - - - - - - - - - - - - - - - - - - - - GAGATG