1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAACAGTGTGCTCGCACCGCCGGCGCCATGAGgtacggattcactccctcgtcgtggctgcgtgctgctttgtatgcgagcaacggagaaatagttccgcgctgctgctgctgctaatgaagcgatgttatg...
species | Oryza sativa |
transcript | LOC_Os01g64090.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAACAGTGTGCTCGCACCGCCGGCGCCATGAG TAAGTTGCAGAGTGATGCTCTTAGGGAGGCAATCTCACAAATTACTAGTGAEST: gi|218503115|gb|FG965410.1|FG965410
genomic: GAACAGTGTGCTCGCACCGCCGGCGCCATGAGgtacggattc ... tgtgtttcagTAAGTTGCAGAGTGATGCTCTTAGGGAGGCAATCTCACAAATTACTAGTGA
EST: GAACAGTGTGCTCGCACCGCCGGCGCTATGAG TAAGTTGCAGAGTGATGCTCTTAGGGAGGCAATCTCACAAATTACTAGTGAEST: gi|58690950|gb|CK079637.1|CK079637
genomic: GAACAGTGTGCTCGCACCGCCGGCGCCATGAGgtacggattc ... tgtgtttcagTAAGTTGCAGAGTGATGCTCTTAGGGAGGCAATCTCACAAATTACTAGTGA
EST: GAACAGTGTGCTCGCACCGCCGGCGCCATGAG TAAGTTGCAGAGTGATGCTCTTAGGGAGGCAATCTCACAAATTACTAGTGA
genomic: GAACAGTGTGCTCGCACCGCCGGCGCCATGAGgtacggattc ... tgtgtttcagTAAGTTGCAGAGTGATGCTCTTAGGGAGGCAATCTCACAAATTACTAGTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACAGTGTGCTCGCACCGCCGGCGCCATGAGgtacggattcactccctcgtcgtggctgcgtgctgctttgtatgcgagcaacggagaaatagttccgcgctgctgctgctgctaatgaagcgatgttatg
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