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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGCATAGGCACAGGATACGATCTGTCCGTTACCACCTTCTCTCCGGATGGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggtttaactgctcccctttctttccttccttttgctaccgcttcttcctttctgtgtgcaattatgtaatgacgttctaatatttgttaacag

Basic information

species Oryza sativa
transcript LOC_Os01g59600.2
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g59600.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G130398_T01 (Zea mays), 5'ss of exon 2
GCAGCATAGGCACAGGATACGATCTGTCCGTTACCACCTTCTCTCCGGATGGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggtttaactgctcccctttctttccttccttttgctaccgcttcttcctttctgtgtgcaattatg---------taatgacgttctaatatttgttaacag
|||||||||||||||| || ||| |||| || || |||||||| || |||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||| | | | | ||| | | || || | | ||| | | | || ||| | | ||| || | ||||| | |||||
GCAGCATAGGCACAGGTTATGATTTGTCTGTCACGACCTTCTCCCCAGATGGTCGTGTCTTCCAGGTCGAGTATGCCACCAAGGCCGTCGACAACAGCGGgtctgcctcccacttcctatagtgttttgcttcacttattattcccttttctctgttctatgtaatcttacttggttattgttgatgtcatggtatttatgaacag

upper sequence: LOC_Os01g59600.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G008623_T01 (Zea mays), 5'ss of exon 2
GCAGCATAGGCACAGGATACGATCTGTCCGTTACCACCTTCTCTCCGGATGGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggtttaactgctcccc-----------tttctttccttc----cttttgctaccgcttcttcctttctgtgtgcaattatgtaa-------tgacgttctaatatttgttaacag
|||||||||||||||| ||||||||||| || ||||||||||| || |||||||| ||||||||||| || ||||| || ||||| ||||||||||||||||| | || ||||| ||| | | ||| |||| ||| || | | ||| | | | || ||| | | | | | | ||||||| |||||
GCAGCATAGGCACAGGTTACGATCTGTCTGTCACCACCTTCTCCCCAGATGGTCGTGTCTTCCAGGTCGAATATGCTACCAAGGCCGTCGACAACAGCGGgttagattccactgcctcccacctcctattgtgtttttgcttcaagccttcacttatttccttttctctgttctatgtaatcttattggtttggttaatgccatggtatttgtgaacag

upper sequence: LOC_Os01g59600.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G445100_T01 (Zea mays), 5'ss of exon 2
GCAGCATAGGCACAGGATACGATCTGTCCGTTACCACCTTCTCTCCGGATGGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggtttaactgctcccctttctttccttccttttgct-accgcttcttcctttctgtgtgcaattatgtaatgacgttctaatatttgttaacag
|||||||||||||||| || |||||||| || |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | || ||||| ||| | | || ||||||| | | || || | | || | | | |||| | | ||||||| || ||
GCAGCATAGGCACAGGTTATGATCTGTCTGTCACCACCTTCTCTCCCGATGGCCGCGTCTTCCAGGTCGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttagattccactgcctcccacttcctattttgttttgcttgacttgttccccgttttctatgaatcttattgatgaagccatggtatttgtgaatag

upper sequence: LOC_Os01g59600.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GLYMA05G14330.1 (Glycine max), 5'ss of exon 1
GCAGCATAGGCACAGGATACGATCTGTCCGTTACCACCTTCTCTCCGGATGGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggtttaactgctcccctttctttccttccttttgctaccgcttcttcctttctgtg----tgcaattatgtaatgacgttc---taatatttgttaacag----------------------------------------------------------------------
| ||||| || ||||| |||||||| || || ||||| ||||| || ||||| ||||| |||||| | ||||||||| | || || ||||||||||||||||| | | | | || | | || | || || || | ||| | |||| || ||| ||||| || | | |
GTAGCATCGGTACAGGTTACGATCTATCGGTCACCACTTTCTCCCCTGATGGCCGCGTTTTCCAGATCGAGTATGCCGCTAAAGCCGTCGACAACAGCGGgttggtacttatcattattattattattattattattattattatacttttaaattcgtggttttaaaattgaaaaaaagagtttatttaataattatgagtatgttttttttttttaaatgattttgtaatttttgtattggtagtgatcttagatttgaaactttgttgcag

upper sequence: LOC_Os01g59600.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GLYMA19G17920.1 (Glycine max), 5'ss of exon 1
GCAGCATAGGCACAGGATACGATCTGTCCGTTACCACCTTCTCTCCGGATGGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggtttaactgctcccctttctttccttccttttgctaccgcttcttcctttctgtgtgcaattat-gtaatgacgttctaatatttgttaacag--------------------------------------------
||||||| || ||||| |||||||| ||||| ||||| ||||| || ||||| || || |||||| | |||||||| | || || ||||| ||||||||||| ||| | | ||| | | | ||||| | | | | | | | ||| || | || || | |||| ||
GCAGCATCGGAACAGGTTACGATCTCTCCGTCACCACTTTCTCCCCCGATGGCCGTGTTTTCCAGATCGAGTATGCTGCCAAAGCCGTCGATAACAGCGGgtt-ggtactttttttttttttttaattcgtggttttgaaattgaaacggaaatagtttattgaataattatgatttttttttgtgattttgtatttttttttgtatttggtagtgatcctagatttgaaactttgttgtag

upper sequence: LOC_Os01g59600.1 (Oryza sativa), 5'ss of exon 2
lower sequence: AT2G27020.1 (Arabidopsis thaliana), 5'ss of exon 1
GCAGCATAGGCACAGGATACGATCTGTCCGTTACCACCTTCTCTCCGGATGGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggtttaactgctcccctttctttccttccttttgctaccgcttcttcctttctg-----tgtgcaattatg--taatgacgtt--ctaatatttgttaacag-------------------------
| ||||| || || || |||||||| ||||| ||||| |||||||| ||||| || || |||||| | ||||| ||| | || |||||||||||||| ||||| | | | | | | | | ||||| | || ||||| | || ||| || || ||| || |||||||| ||
GTAGCATTGGAACTGGGTACGATCTCTCCGTCACCACTTTCTCTCCCGATGGCCGTGTTTTCCAGATCGAGTACGCCGCTAAAGCTGTCGACAACAGTGGgttagttggctttatcttcttcgatcttcgccctttagtagatcggatttagcttctgaaaactttgagattttggttatcgacacgaattagggtttgttaaaagtctttccctttttttttcttcgcag

upper sequence: LOC_Os01g59600.1 (Oryza sativa), 5'ss of exon 2
lower sequence: Vv08s0040g00410.t01 (Vitis vinifera), 5'ss of exon 1
GCAGCATAGGCACAGGATACGATCTGTCCGTTACCACCTTCTCTCCGGATGGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggtttaactgctcccctttctttccttccttttgctaccgcttcttcctttctgtgtgcaattatgtaatg--acgttctaatatttgttaacag--
|||||||||| || ||||||||||| || || ||||| |||||||| ||||| ||||| |||||| | || || ||| | || |||||||| ||||||||||| || | || | |||| ||| || |||| ||| || | || ||| | | || | || | | |
GCAGCATAGGAACTGGATACGATCTCTCTGTCACCACATTCTCTCCTGATGGCCGCGTTTTCCAGATCGAATACGCCGCCAAAGCTGTCGATAACAGCGGgtt-aattctccatcttctctttttttttttttttttttaacctaaatcatctgtttggttgctaagaaagggtgggagaaatgaacggaacctcaaaatt

upper sequence: LOC_Os01g59600.1 (Oryza sativa), 5'ss of exon 2
lower sequence: PP1S72_57V6.7 (Physcomitrella patens), 5'ss of exon 3
GCAGCATAGGCACAGGATACGATCTGTCCGTTACCACCTTCTCTCCGGATGGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggt-ttaactgctcccctttctttccttcct-tttgctaccgcttcttcctttctgtgtgcaattatgtaatgacgttctaat--atttgttaacag
|||||| |||| ||||| || |||||||||||||| || || ||||| || ||||| ||| | ||||| || ||||||||||||| | || || ||| | || ||| || | || ||| | | | ||| | | || | || ||| | || ||
-----------------TACGATTTGTCGGTTACTACTTTCTCTCCGGATGGGCGAGTATTCCAAGTCGAGTACGCCTCCAAGGCGGTGGACAACAGCGGgtatgtccttcgaaactatcctctgaggaaatcaaattttctttctctcctttatggtcttcttcaactccttgatcttgctcaaattagggttttggca-

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88391292|gb|CI595546.1|CI595546
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|33692105|gb|CF320344.1|CF320344
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|33686423|gb|CF314662.1|CF314662
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTC
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTC
EST: gi|88391006|gb|CI592914.1|CI592914
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACCTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGAC-TGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|218496122|gb|FG967266.1|FG967266
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAGTGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88425566|gb|CI569290.1|CI569290
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88407414|gb|CI583872.1|CI583872
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88738269|gb|CI761777.1|CI761777
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88739654|gb|CI763162.1|CI763162
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88393093|gb|CI616577.1|CI616577
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|58596536|gb|CK007064.1|CK007064
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAGTGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|58601557|gb|CK012085.1|CK012085
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAGTGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|33657519|gb|CF280133.1|CF280133
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|12622988|gb|AU173201.1|AU173201
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88423678|gb|CI617030.1|CI617030
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88763617|gb|CI773064.1|CI773064
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88722486|gb|CI745996.1|CI745996
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88343491|gb|CI621859.1|CI621859
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTGGGTGTGG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTGGGTGTGG
EST: gi|88300705|gb|CI589697.1|CI589697
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88420790|gb|CI564626.1|CI564626
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTC-TG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88454340|gb|CI569912.1|CI569912
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88718828|gb|CI742338.1|CI742338
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|29668731|gb|CB665006.1|CB665006
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|33686716|gb|CF314955.1|CF314955
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88396858|gb|CI578007.1|CI578007
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88400550|gb|CI595971.1|CI595971
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|87008998|gb|CI304941.1|CI304941
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|163919763|gb|EG714885.1|EG714885
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
EST: gi|88722475|gb|CI745985.1|CI745985
EST:     GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGG                         GACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG
genomic: GGTCGCGTCTTCCAGGTTGAGTATGCCACGAAGGCTGTCGACAACAGCGGgttcggttta ... ttgttaacagGACTGTTGTTGGAATCAAATGCAAAGATGGAATCGTCCTG