Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|29668997|gb|CB665272.1|CB665272EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
EST:
gi|58694230|gb|CK082917.1|CK082917EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
EST:
gi|29623281|gb|CB628292.1|CB628292EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAACTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
EST:
gi|33683399|gb|CF311638.1|CF311638EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
EST:
gi|29671851|gb|CB668126.1|CB668126EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
EST:
gi|29658148|gb|CB654423.1|CB654423EST: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAG AGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
genomic: TTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttcta ... gtttgtttagAGTACTGTAAGCTGTGGCACCGGGGATGGCCAACCTCATTGGCTACTGCTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AAACCTGTCGAATGGGAGGCACCATCATAATTATATGATCCAGCATTATGAAGTAACCATCAACTGATCTAAGCTGGGAGgtaatttctaaacctcacctctgatgtttgatgaatttcattttcttgtaaatactttttttgaccagatttcctgccatatatatttacatatatgatc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG