Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86415864|gb|CI029875.1|CI029875EST: TGGAGTGAAGACCCCAGATTCTGGACTTGGAAACCTCTGAAAGAAGGAAGCAG
genomic: TGGAGTGAAGACCCCAGATTCTGGACTTGGAAACCTCTGAAAGAAGG-A--AGgtactattat ... tcaacagc
EST:
gi|117243502|gb|CT843098.1|CT843098EST: TGGAGTGAAGACCCCAGATTCTGGACTTGGGAACCTCTGAAAGAAGGAAG TGATGCTGACACTGACACCCAGATCGAAGTGCCGTCGCTGCAGAACGTCTG
genomic: TGGAGTGAAGACCCCAGATTCTGGACTTGGAAACCTCTGAAAGAAGGAAGgtactattat ... tcaacagcagTGATGCTGACACTGACACCCAGATCGAAGTGCCGTCGCTGCAGAACGTCTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAACTAGGAACAACTGCTTCATGCTGTTTCCCAGAGGCTTGTCTATCACTTGGAGTGAAGACCCCAGATTCTGGACTTGGAAACCTCTGAAAGAAGGAAGgtactattatttaagaagcattattgtgaataacagaaggcagattaggttttgtttcaggaattaggcatacttctttcattgttctgaatctgatatgttaatcaacagcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA