1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
GGATCTCCTTCGCACAGACTCACAAAGCACGGATTCTTCCTTGAAAGCAATGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgcctttttgtattgtcgctgatacatatttacattgccgttatctaggctaacaaacaaattctggctactgcttaccattcag
species | Oryza sativa |
transcript | LOC_Os03g43930.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87014872|gb|CI271471.1|CI271471
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88236401|gb|CI235603.1|CI235603
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|25802926|gb|CA758887.1|CA758887
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCTGGCCTCGACATGCTGGAGEST: gi|88235827|gb|CI235029.1|CI235029
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: GGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87036584|gb|CI191206.1|CI191206
genomic: GGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87016506|gb|CI273716.1|CI273716
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87036221|gb|CI190843.1|CI190843
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88235904|gb|CI235106.1|CI235106
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86436847|gb|CI118569.1|CI118569
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86487572|gb|CI130205.1|CI130205
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGG-C----T- G-T--TCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87039801|gb|CI194423.1|CI194423
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88233296|gb|CI233145.1|CI233145
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88983063|gb|CI020627.1|CI020627
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88236116|gb|CI235318.1|CI235318
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88236264|gb|CI235466.1|CI235466
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88837847|gb|CI371425.1|CI371425
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: CAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88235826|gb|CI235028.1|CI235028
genomic: CAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: GCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86486713|gb|CI129346.1|CI129346
genomic: GCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87027472|gb|CI272237.1|CI272237
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88248987|gb|CI248836.1|CI248836
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87039979|gb|CI194601.1|CI194601
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87034732|gb|CI189356.1|CI189356
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTCCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86499474|gb|CI142107.1|CI142107
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86480098|gb|CI122731.1|CI122731
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86827312|gb|CI270963.1|CI270963
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87041845|gb|CI196467.1|CI196467
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86478938|gb|CI121571.1|CI121571
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88984269|gb|CI020184.1|CI020184
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88197420|gb|CI196727.1|CI196727
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87036373|gb|CI190995.1|CI190995
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87038610|gb|CI192649.1|CI192649
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88198258|gb|CI198108.1|CI198108
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87013876|gb|CI271267.1|CI271267
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87040785|gb|CI195407.1|CI195407
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88197905|gb|CI197755.1|CI197755
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87039024|gb|CI193646.1|CI193646
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGAGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88234749|gb|CI234598.1|CI234598
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86481983|gb|CI124616.1|CI124616
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87036851|gb|CI191473.1|CI191473
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCACCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87033348|gb|CI187972.1|CI187972
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87040859|gb|CI195481.1|CI195481
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86437481|gb|CI119203.1|CI119203
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87040080|gb|CI193289.1|CI193289
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88233458|gb|CI233307.1|CI233307
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTG GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87040822|gb|CI195444.1|CI195444
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88235694|gb|CI234896.1|CI234896
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88829447|gb|CI074317.1|CI074317
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87037761|gb|CI192383.1|CI192383
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86855875|gb|CI271094.1|CI271094
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87022878|gb|CI269814.1|CI269814
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87039677|gb|CI194299.1|CI194299
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|86482094|gb|CI124727.1|CI124727
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88235250|gb|CI236452.1|CI236452
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88234404|gb|CI234253.1|CI234253
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88236633|gb|CI235835.1|CI235835
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88236276|gb|CI235478.1|CI235478
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87037625|gb|CI192247.1|CI192247
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88957022|gb|CI095071.1|CI095071
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|87037463|gb|CI192085.1|CI192085
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88247554|gb|CI247403.1|CI247403
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAGEST: gi|88197640|gb|CI197490.1|CI197490
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
EST: TGTGGCAACACTCTGATTCAATCATGTGCTGCACCCTG-A----A----G GCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
genomic: TGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgccttt ... taccattcagGCTGCTCCTGTGTTCACCTTCGCCAACCAAGCCGGCCTCGACATGCTGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATCTCCTTCGCACAGACTCACAAAGCACGGATTCTTCCTTGAAAGCAATGTGGCAACACTCTGATTCAATCATGTGCTGCTCCCTGAAGGTCAGTGTGgtgcgcctttttgtattgtcgctgatacatatttacattgccgttatctaggctaacaaacaaattctggctactgcttaccattcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG