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GGAGAAAGAGAATTACAGATTTAGATGGAACCGAGAGCGATATCCCATGGTGGATTGTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAAgtaattgctcatttctacttcctattctcctaagatggtatttttctttatatctttggaccattgcttgagttctttcgagatgctgcactatcttgga...
species | Oryza sativa |
transcript | LOC_Os12g06810.1 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: GTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAA GTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAACEST: gi|29666969|gb|CB663244.1|CB663244
genomic: GTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAAgtaattgctc ... tttaatgtagGTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAAC
EST: TGGATTGTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAA GTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAACEST: gi|33796033|gb|CF323884.1|CF323884
genomic: TGGATTGTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAAgtaattgctc ... tttaatgtagGTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAAC
EST: TGGATTGTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGA-TACAAA GTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAACEST: gi|29683579|gb|CB679854.1|CB679854
genomic: TGGATTGTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAAgtaattgctc ... tttaatgtagGTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAAC
EST: GTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAA GTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAACEST: gi|58600096|gb|CK010624.1|CK010624
genomic: GTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAAgtaattgctc ... tttaatgtagGTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAAC
EST: TGGATTGTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAA GTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAACEST: gi|29670914|gb|CB667189.1|CB667189
genomic: TGGATTGTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAAgtaattgctc ... tttaatgtagGTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAAC
EST: CTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAA GTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAAC
genomic: CTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAAgtaattgctc ... tttaatgtagGTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACATAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGAAAGAGAATTACAGATTTAGATGGAACCGAGAGCGATATCCCATGGTGGATTGTGGACTGTGTTGAGCATAATCGATTTCCAAAAGAGAATACAAAgtaattgctcatttctacttcctattctcctaagatggtatttttctttatatctttggaccattgcttgagttctttcgagatgctgcactatcttgga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA