1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagcacttctattatcaacgctaacagtaatgtgatttatggacctttacccaaaatctcatttcatctatcatccattttcag
species | Oryza sativa |
transcript | LOC_Os06g13810.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: AAGCCAGTGATCAAGAGGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGANTGGTCCCTCGAGAEST: gi|89184067|gb|CI046632.1|CI046632
genomic: AAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88503085|gb|CI430591.1|CI430591
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTAG-CG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGEST: gi|88443149|gb|CI546721.1|CI546721
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTT-GACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAG
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88962496|gb|CI097648.1|CI097648
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: ACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88248905|gb|CI247989.1|CI247989
genomic: ACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89180255|gb|CI044534.1|CI044534
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|33687067|gb|CF315306.1|CF315306
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|86255558|gb|CI065235.1|CI065235
genomic: GCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88298292|gb|CI561085.1|CI561085
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|157650149|gb|EX449783.1|EX449783
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88384752|gb|CI556630.1|CI556630
genomic: GTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88456553|gb|CI547269.1|CI547269
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: TGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89162035|gb|CI103571.1|CI103571
genomic: TGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88289703|gb|CI522836.1|CI522836
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTG-AACNTTGACG GGGCACCGTGTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGEST: gi|86488059|gb|CI130692.1|CI130692
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAAC-TTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAG
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88957467|gb|CI095408.1|CI095408
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|218492354|gb|FG951898.1|FG951898
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89179882|gb|CI044161.1|CI044161
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|58677751|gb|CK066438.1|CK066438
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88247475|gb|CI247324.1|CI247324
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88438790|gb|CI546272.1|CI546272
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|86486432|gb|CI129065.1|CI129065
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|29678699|gb|CB674974.1|CB674974
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|29632620|gb|CB637629.1|CB637629
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|86435722|gb|CI106955.1|CI106955
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88563084|gb|CI493801.1|CI493801
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: CACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGGCG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89194206|gb|CI116643.1|CI116643
genomic: CACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89198488|gb|CI007548.1|CI007548
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88849729|gb|CI089835.1|CI089835
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88957444|gb|CI095385.1|CI095385
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|13806214|gb|AU181418.1|AU181418
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88205596|gb|CI205445.1|CI205445
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAAC-TGTACG GGGCACCGTTTAAGAAGTTTGCTTCATTGTCGAGATGAGTGGTCCCTCAAEST: gi|58687019|gb|CK075706.1|CK075706
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTG-ACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTG-CGAGATGAGTGGTCCCTCAA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89180424|gb|CI044703.1|CI044703
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|86261017|gb|CI066692.1|CI066692
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTNTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|163927712|gb|EG712472.1|EG712472
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: AGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|29689205|gb|CB685480.1|CB685480
genomic: AGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|58684244|gb|CK072931.1|CK072931
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88445250|gb|CI552303.1|CI552303
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: TATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89183317|gb|CI045882.1|CI045882
genomic: TATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88850841|gb|CI096231.1|CI096231
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88507469|gb|CI434975.1|CI434975
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: TACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCNTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88516855|gb|CI442511.1|CI442511
genomic: TACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: AGTACGAGCCAGTGATCAAGAAGGGTATGGTGGAACTTGACG GGGCACCGTTTAAGGAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88437922|gb|CI536081.1|CI536081
genomic: AGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCA-TAGATCAAGAAGGCTATGGTGGAACTTTAGCG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGEST: gi|55431802|gb|CV728921.1|CV728921
genomic: GAAAGTACAAGCCAGT-GATCAAGAAGGCTATGGTGGAACTTGA-CGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAG
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88246487|gb|CI246336.1|CI246336
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88434872|gb|CI549069.1|CI549069
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|2799286|gb|AA753811.1|AA753811
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: ACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|86433428|gb|CI093771.1|CI093771
genomic: ACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|33687066|gb|CF315305.1|CF315305
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88442444|gb|CI544011.1|CI544011
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: CAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88849084|gb|CI087606.1|CI087606
genomic: CAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|13807248|gb|AU181879.1|AU181879
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: CAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCNCCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|58672321|gb|CK061007.1|CK061007
genomic: CAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88292068|gb|CI532660.1|CI532660
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GGAAGTACAAGCCAGTGATCAAGGAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTGTGCTTCATTGGGAGATGAGTGGTCCCTCAAGAEST: gi|88247683|gb|CI247532.1|CI247532
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|428916|gb|D25072.1|D25072
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTTATCAAGAAGGCTATGGTGGA-CTTGACG GGGCAC-GTTTAAGAAGTTTGCTTCATTGCGA-ATGAGTNGTCCCTCAAGAEST: gi|88374935|gb|CI521001.1|CI521001
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: TGATCAANAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89173495|gb|CI041388.1|CI041388
genomic: TGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GCACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88442178|gb|CI560419.1|CI560419
genomic: GCACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: TACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|58587615|gb|CF985923.1|CF985923
genomic: TACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCGCTGCAAGEST: gi|218497895|gb|FG966087.1|FG966087
genomic: GGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCT-CAAG
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|8527563|gb|AU092378.1|AU092378
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88197484|gb|CI197186.1|CI197186
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88249646|gb|CI249495.1|CI249495
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|38481421|gb|CF965510.1|CF965510
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCAGCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|163927439|gb|EG713879.1|EG713879
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|29686237|gb|CB682512.1|CB682512
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89179985|gb|CI044264.1|CI044264
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88444188|gb|CI554905.1|CI554905
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|86846305|gb|CI339881.1|CI339881
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGG-ACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|86854109|gb|CI252100.1|CI252100
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|86259725|gb|CI065598.1|CI065598
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: ATCAAGAAGGCTATGGTGGAAC-TGAGCG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGEST: gi|88219371|gb|CI218931.1|CI218931
genomic: ATCAAGAAGGCTATGGTGGAACTTGA-CGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAG
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTGTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89189404|gb|CI048943.1|CI048943
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88250241|gb|CI348471.1|CI348471
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGGTGGTCCCTCAAGEST: gi|88255890|gb|CI353761.1|CI353761
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGA-GTGGTCCCTCAAG
EST: GTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGGTGAGTGGTCCCTCAAGAEST: gi|88247174|gb|CI247023.1|CI247023
genomic: GTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|89184848|gb|CI048404.1|CI048404
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88852411|gb|CI374179.1|CI374179
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGT-GAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAEST: gi|88243281|gb|CI244403.1|CI244403
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
EST: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACG GGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
genomic: GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagca ... ccattttcagGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGgtacgaagcacttctattatcaacgctaacagtaatgtgatttatggacctttacccaaaatctcatttcatctatcatccattttcag
- - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - GGTGGA