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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTAACCAAATTGGATCTGTTACTGAGAGCATTGAGGCTGTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatatgctgttttttttatttactgttctgcgtcttgtatgtcctaccttctttcctgacttcaatatttaatttccttgatttggttgcag

Basic information

species Oryza sativa
transcript LOC_Os03g14450.1
intron # 14
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os03g14450.2 (Oryza sativa), 5'ss of exon 11
lower sequence: Vv16s0022g01770.t01 (Vitis vinifera), 5'ss of exon 14
GTTAACCAAATTGGATCTGTTACTGAGAGCATTGAGGCTGTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatatgctgttttttttatttactgttctgcgtcttgtatgtcctaccttctttcctgacttcaatatttaatttccttgatttggttgcag
|| || ||||| || || || |||||||||||||| ||||| || ||||| ||||| |||||||||||||| ||| | |||||| | |||||   | ||| | ||| | |  |  | | || |  || || | ||   |  | |   |    | | || |  ||   || |   ||   |      
GTGAATCAAATCGGTTCAGTAACTGAGAGCATTGAAGCTGTGAAAATGTCTAAACGAGCTGGCTGGGGTGTTATGGCAAGTCACCGAAGgtaca-aaatgttttttgtctactaaatttttttcagtattatttgaaatggcattact----aatccagt--ttcccttgcacaatacag------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86430870|gb|CI083293.1|CI083293
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88841141|gb|CI080595.1|CI080595
EST:     AAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: AAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86436551|gb|CI118273.1|CI118273
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|8527321|gb|AU092136.1|AU092136
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCNGTCACAGGNG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86429290|gb|CI075971.1|CI075971
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89197132|gb|CI051862.1|CI051862
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88845546|gb|CI084471.1|CI084471
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|287175|gb|D15980.1|D15980
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86600070|gb|CI258410.1|CI258410
EST:     TGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: TGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88257439|gb|CI359827.1|CI359827
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88276803|gb|CI395966.1|CI395966
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88510633|gb|CI438139.1|CI438139
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88966623|gb|CI353174.1|CI353174
EST:     CAAGATGTCAAAAACGTGCTGGCTGGGGTGTGATGACCAAGTCACAGGAG                         TGGTGAAACTGAGGATACAATTCATTGCTGATCTGGCAGTTGGTTTATCCA
genomic: CAAGATGTC-AAAACGTGCTGGCTGGGGTGTGATGACC-AGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATAC-ATTCATTGCTGATCTGGCAGTTGGTTTATCCA
EST: gi|88291451|gb|CI530041.1|CI530041
EST:     GTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88837746|gb|CI079106.1|CI079106
EST:     GTCAAGAAGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGAAACATTCATTGCTGATCTGGCAGTTGGTTAATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86260061|gb|CI065934.1|CI065934
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86525380|gb|CI165586.1|CI165586
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86538875|gb|CI179081.1|CI179081
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88219213|gb|CI220486.1|CI220486
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGGGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|33810065|gb|CF330920.1|CF330920
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88906783|gb|CI375855.1|CI375855
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCACTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88265350|gb|CI369124.1|CI369124
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88260876|gb|CI361464.1|CI361464
EST:     TCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAAGTCACAGGAG                         TGTTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: TCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACC-AGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86878119|gb|CI340660.1|CI340660
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88466075|gb|CI519948.1|CI519948
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86873353|gb|CI341578.1|CI341578
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88253943|gb|CI352569.1|CI352569
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86852115|gb|CI317860.1|CI317860
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTTATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88322320|gb|CI540288.1|CI540288
EST:     CTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: CTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88455322|gb|CI519343.1|CI519343
EST:     ACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: ACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88829394|gb|CI074264.1|CI074264
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88464687|gb|CI534824.1|CI534824
EST:     CAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: CAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89184182|gb|CI046747.1|CI046747
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88838192|gb|CI372760.1|CI372760
EST:     GTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86413406|gb|CI067811.1|CI067811
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89184015|gb|CI046580.1|CI046580
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86489392|gb|CI132025.1|CI132025
EST:     GTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86865054|gb|CI344579.1|CI344579
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|27576854|gb|CA999548.1|CA999548
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCA
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCA
EST: gi|88836429|gb|CI078326.1|CI078326
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86430946|gb|CI083369.1|CI083369
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86854613|gb|CI258906.1|CI258906
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88839949|gb|CI079403.1|CI079403
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTAATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|5900716|gb|AU078371.1|AU078371
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86431088|gb|CI083511.1|CI083511
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86599084|gb|CI355701.1|CI355701
EST:     TCAAAACGTGCTGGCTTGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: TCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|25799533|gb|CA755494.1|CA755494
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|29678594|gb|CB674869.1|CB674869
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88829973|gb|CI074645.1|CI074645
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTAATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|9864951|gb|AU100701.1|AU100701
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|5455545|gb|AU075760.1|AU075760
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88254516|gb|CI353340.1|CI353340
EST:     TCAAGATGTCAAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: TCAAGATGTC-AAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88849664|gb|CI089770.1|CI089770
EST:     GTCAAGATGTCAAAACGCGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88384226|gb|CI551152.1|CI551152
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|8528267|gb|AU093082.1|AU093082
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88281494|gb|CI402890.1|CI402890
EST:     AGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: AGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88459699|gb|CI521959.1|CI521959
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86852543|gb|CI320468.1|CI320468
EST:     GTCAAGATCTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGCCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88273613|gb|CI394019.1|CI394019
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89195154|gb|CI051267.1|CI051267
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88974238|gb|CI019911.1|CI019911
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86535052|gb|CI175258.1|CI175258
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88998519|gb|CI389206.1|CI389206
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGTATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86843521|gb|CI339579.1|CI339579
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86430895|gb|CI083318.1|CI083318
EST:     GTCAAGACGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTNATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|87024296|gb|CI257037.1|CI257037
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88839999|gb|CI079453.1|CI079453
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGAAACATTCATTGCTGATCTGGCAGTTGGTTAATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88841649|gb|CI080905.1|CI080905
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89184770|gb|CI048326.1|CI048326
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88488854|gb|CI426125.1|CI426125
EST:     TCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: TCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86251762|gb|CI018954.1|CI018954
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|33810063|gb|CF330919.1|CF330919
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88221172|gb|CI221128.1|CI221128
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86851735|gb|CI315313.1|CI315313
EST:     GTCAAGATGTCAAAACGTGATGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGTATACATTCATTGCTGATCTGGCAGTTGGGTTTATCCA
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTT-GGTTTATCCA
EST: gi|88845255|gb|CI084180.1|CI084180
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88831361|gb|CI083755.1|CI083755
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTNATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88837682|gb|CI079042.1|CI079042
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88972024|gb|CI018490.1|CI018490
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86911281|gb|CI317616.1|CI317616
EST:     CCAGTCACAGGAG                         TGGTAAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: CCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88840210|gb|CI079664.1|CI079664
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTNATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86435388|gb|CI106621.1|CI106621
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88837558|gb|CI078918.1|CI078918
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86415101|gb|CI069504.1|CI069504
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|13895988|gb|AU182324.1|AU182324
EST:     ATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: ATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|33685464|gb|CF313703.1|CF313703
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88840605|gb|CI080059.1|CI080059
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89197240|gb|CI051970.1|CI051970
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88280019|gb|CI401217.1|CI401217
EST:     TGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGCCANTTGGTTTATCCAC
genomic: TGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88262264|gb|CI365840.1|CI365840
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|5455544|gb|AU075759.1|AU075759
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89175061|gb|CI041139.1|CI041139
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88439417|gb|CI536389.1|CI536389
EST:     CCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: CCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|218503770|gb|FG954179.1|FG954179
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCCGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89184173|gb|CI046738.1|CI046738
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|15008820|gb|AU223208.1|AU223208
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88218037|gb|CI217886.1|CI217886
EST:     TCATAGATGTCTAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGTTGAAACTGAGGATACATTCATTACTGATCTGGCAGTTGGTTTATCCAC
genomic: TCA-AGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88511459|gb|CI438965.1|CI438965
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|568037|gb|D38872.1|D38872
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86436429|gb|CI118151.1|CI118151
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86594831|gb|CI258085.1|CI258085
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88262265|gb|CI365841.1|CI365841
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88837559|gb|CI078919.1|CI078919
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTAATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88840060|gb|CI079514.1|CI079514
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTAATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89189347|gb|CI048886.1|CI048886
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|86413328|gb|CI067733.1|CI067733
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAGCTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTAATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|89178811|gb|CI391809.1|CI391809
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCACTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88830173|gb|CI076429.1|CI076429
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88832226|gb|CI017460.1|CI017460
EST:     TGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATGGCTGATCTGGCAGTTGGTTTATCCAC
genomic: TGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|88837587|gb|CI078947.1|CI078947
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|8528193|gb|AU093008.1|AU093008
EST:     GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: GTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
EST: gi|13805884|gb|AU181243.1|AU181243
EST:     TCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAG                         TGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC
genomic: TCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 51 (upstream exon), 65 (downstream exon)
Score: 93

GTTAACCAAATTGGATCTGTTACTGAGAGCATTGAGGCTGTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatat ... ttggttgcagTGGTGAAACTGAGGATACATTCATTGCTGATCTGGCAGTTGGTTTATCCACG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTTAACCAAATTGGATCTGTTACTGAGAGCATTGAGGCTGTCAAGATGTCAAAACGTGCTGGCTGGGGTGTGATGACCAGTCACAGGAGgtatgcatatgctgttttttttatttactgttctgcgtcttgtatgtcctaccttctttcctgacttcaatatttaatttccttgatttggttgcag

- - - - - - - - - - - - - - - - - - - - - AAGATG