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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagacaaattttgattcaagtatgcaagctataccttgatcaattggtaaaattcctagttccttttgcacttttcccaagttgtcgtttgcaac...

Basic information

species Oryza sativa
transcript LOC_Os09g26880.3
intron # 13
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: GRMZM2G130440_T02 (Zea mays), 5'ss of exon 13
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaag--tagacaaattttgattcaagtatgcaagctataccttgatcaattggtaaaattcctagttccttttgcacttttcccaagt-tgtcgtttgcaac
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  || ||| |||||   |    | ||||    | |   | |  |  |   |  |||  |||  |  |    | |      |  |   |  ||||  | 
GTGCTGAAATTGGTGGAGCATTTGGTGGAGAAAAAGCAACTGGTGGTGGACGAGAAGCAGGGAGTGATTCCTGGAAGCAGTACATGAGGAGGGCGACTTGgtaagagtatacacatttttgctgtgat-tgcatttgaaatggt-actatatataatcattattagagcagtgcatagtaagggtagttgcataatttgata-

upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: GRMZM5G828253_T01 (Zea mays), 5'ss of exon 2
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaag--tagacaaattttgatt-caagtatgc---aagctataccttg----atca--attggtaaaattcctagttccttttgcacttttcccaagttgtcgtttgcaac---------------------------------------------------------------
||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  || ||| |||||  ||   |||       ||    |||  |     ||||  ||| |   | | | ||||     | |||     |     |   |   ||||||                                                               
GTGCTGAAATTGGTGGAGCATTTGGTGGAGAAAAAGCAGCTGGTGGTGGACGAGAAGCAGGGAGTGATTCCTGGAAGCAGTACATGAGGAGGGCGACTTGgtaagagtatacacatttttgttgtgagtgcatttgaaatggtactatatataatcattattagagcagtgcatagtaagggtagcagggc-cgggcctaagcacgtgcaacatgtgttattttggaatggatttctaagtagtctactaatgatttgggttttaattttgtcag

upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: GRMZM2G070514_T02 (Zea mays), 5'ss of exon 6
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaag--tagacaaattttgatt-caagtatgc---aagctataccttg----atca--attggtaaaattcctagttccttttgcacttttcccaagttgtcgtttgcaac---------------------------------------------------------------
||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  || ||| |||||   |   |||       ||    |||  |     ||||  ||| |   | | | ||||     | |||     |     |   |   ||||||                                                               
GTGCTGAAATTGGTGGAGCATTTGGTGGAGAAAAAGCAGCTGGTGGTGGACGAGAAGCAGGGAGTGATTCCTGGAAGCAGTACATGAGGAGGGCGACTTGgtaagagtatacacatttttgctgtgagtgcatttgaaatggtactatatataatcattattagagcagtgcatagtaagggtagcagggc-cgggcctaagcacgtgcaacaggtgctattttggaatggatttctaagtagtctactaatgatttgggttttaattttgtcag

upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: GRMZM5G820733_T01 (Zea mays), 5'ss of exon 5
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaag--tagacaaattttgatt-caagtatgc---aagctataccttg----atca--attggtaaaattcctagttccttttgcacttttcccaagttgtcgtttgcaac---------------------------------------------------------------
||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  || ||| |||||   |   |||       ||    |||  |     ||||  ||| |   | | | ||||     | |||   | |     |   |   ||||||                                                               
GTGCTGAAATTGGTGGAGCATTTGGTGGAGAAAAAGCAGCTGGTGGTGGACGAGAAGCAGGGAGTGATTCCTGGAAGCAGTACATGAGGAGGGCGACTTGgtaagagtatacacatttttgctgtgagtgcatttgaaatggtactatatataatcattattagagcagtgcatagtaagggtagcagggt-cgggcctaagcacgtgcaacaggtgctattttggaatggatttctaagtagtctactaatgatttgggttttaattttgtcag

upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: GLYMA15G19670.1 (Glycine max), 5'ss of exon 13
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagta--gacaaattt-tgat-tcaagtatgcaagctataccttgatcaattggtaaaattcctagttccttttgcacttttcccaagttgtcgtttgcaac
| ||||| |||||||| || |||||||||||||| || || |||||||| || || || || ||||| ||||||||||| |||||| || |  | || ||||||||   |   ||||| |||| |    | |    | ||||  ||     | ||  |  ||   |  |  | || |||                         
GAGCTGAGATTGGTGGTGCCTTTGGTGGAGAAAAGGCGACCGGTGGTGGCCGTGAGGCGGGAAGTGACTCGTGGAAGCAATACATGCGGCGTTCTACATGgtaagtcttgttgaatttatgatgtttcatttcttggttataagttctattaatgacattataattgctgtccttggcag------------------------

upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: GLYMA09G08150.1 (Glycine max), 5'ss of exon 13
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagta---gacaaattt-tgattcaagtatgca--agctatac-cttgatcaattggtaaaat-tcctagttcctttt----gcacttttcccaagttgtcgt--ttgcaac---------
| |||||||||||||| || |||||||||||||| || || |||||||| || ||||| || ||||| || |||||||| |||||| || |  | || ||||||||    |   ||||| |||||     || |    | ||||  ||   | ||| |  || || || || |   ||||    |||   |    | |   |  |  ||||            
GAGCTGAAATTGGTGGTGCCTTTGGTGGAGAAAAGGCGACAGGTGGTGGCCGTGAAGCGGGAAGTGACTCATGGAAGCAATACATGCGGCGTTCTACATGgtaagtcttcgttgaatttatgattgttacattccttggttataagctctgttaatggtgaatatatcttaatattttttctgtgcatgctcgtaatgacattataattgctgttcttggcag

upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: AT1G54100.2 (Arabidopsis thaliana), 5'ss of exon 13
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagacaaattttgattcaagtatgcaagctataccttgatcaattggtaaaattcctagttccttttgcacttttcccaagttgtcgtttgcaac
| ||||| ||||||||||||||||| || || ||||| ||||||||||| || ||||| || || || || ||||| ||||||||| |  |  | |||||||||       ||| || |      | |        |  | | ||     | | || ||  |  |   |  | |  ||    |   || || ||||  | 
GAGCTGAGATTGGTGGAGCTTTTGGAGGCGAGAAAGCGACTGGTGGTGGTCGTGAAGCTGGAAGCGACTCATGGAAACAGTACATGCGTCGATCGACTTGgtaac------aatcttaagct---tctctctctcttttcataatttccggtttaagtttttgatatttgattc-tttaattcggtttatcttttgacag

upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: Vv11s0016g00900.t01 (Vitis vinifera), 5'ss of exon 13
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagaca---------aattttgattcaagt--atgcaagctataccttgatcaattggtaaaattcctagttccttttgcacttttcccaag--ttgtcgtttgcaac---------
| ||||| ||||||||||||||||| |||||||| || ||||||||||| || |||||||| || || || ||||| || |||||| || |  | || |||||| | |             |||||| | |  ||  |||     ||||  | ||  | ||  | |   |  | |    ||||| | ||  |  |||   | |  ||     |         
GAGCTGAGATTGGTGGAGCTTTTGGGGGAGAAAAGGCAACTGGTGGTGGTCGTGAAGCAGGAAGCGACTCCTGGAAACAATACATGCGGCGTTCAACATGgtaatttggtttaaccgtttgattttgttgcgggtgtatgtttcttatatttcgagtattttatcattatgtt-gcattttttggatttgacaaaagacctataattgttgtccttccacag

upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: EFJ31432 (Selaginella moellendorffii), 5'ss of exon 13
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagacaaattttgattcaagtatgcaagctataccttgatcaattggtaaaattcctagttccttttgcacttttcccaagttgtcgtttgcaac
| ||||| ||||| || |||||||| || || || |||||||| || || || |||||||| || ||||| |||||||||||||||   || || || |||| || |    | || |    |||   |       ||  | |||||  |   |  | ||  |  ||  ||                              
GCGCTGAGATTGGCGGTGCTTTTGGCGGTGAGAAGGCTACTGGCGGCGGTCGCGAAGCAGGAAGCGATTCATGGAAGCAGTACATGCACAGAGCGACATGgtgagaa----agttctctcgcaaaactttggatgatgtcgtgatc--tcattccattttttgcttgtttccag--------------------------

upper sequence: LOC_Os09g26880.3 (Oryza sativa), 5'ss of exon 13
lower sequence: EFJ38712 (Selaginella moellendorffii), 5'ss of exon 13
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagacaaattttgattcaagtatgcaagctataccttgatcaattggtaaaattcctagttccttttgcacttttcccaagttgtcgtttgcaac
||||||| ||||| || |||||||| || || || |||||||| || || || |||||||| || ||||| |||||||||||||||   || || ||||||| || |    |||| |  | |||   |       ||  | |||||  |   |  | ||  |  ||  |   |                           
GTGCTGAGATTGGCGGTGCTTTTGGCGGTGAGAAGGCTACTGGCGGCGGTCGCGAAGCAGGAAGCGATTCATGGAAGCAGTACATGCACAGAGCGACTTGgtgagaa----aattctcttgcaaaactttggatgatctcgtgatc--tcattccattttttgcttgttccag---------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18385463|gb|BM418662.1|BM418662
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88263049|gb|CI366823.1|CI366823
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTT                         TACGATCAACTATGGAAGCGAACTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29669203|gb|CB665478.1|CB665478
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29655856|gb|CB652131.1|CB652131
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29674835|gb|CB671110.1|CB671110
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29668656|gb|CB664931.1|CB664931
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88850062|gb|CI091357.1|CI091357
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86525119|gb|CI165325.1|CI165325
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86537062|gb|CI177268.1|CI177268
EST:     GAGGTCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: GAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88850211|gb|CI091704.1|CI091704
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88970837|gb|CI385434.1|CI385434
EST:     CGAGAAGCAGGGAGTGATTCTTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88850091|gb|CI091386.1|CI091386
EST:     CGAGAAGCAGGGAGTGGTTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|3462549|gb|AF074787.1|AF074787
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29638872|gb|CB643881.1|CB643881
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29665769|gb|CB662044.1|CB662044
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29664946|gb|CB661221.1|CB661221
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86867555|gb|CI337927.1|CI337927
EST:     GAGAAGCCAGGGAGTGATTCGTGGAACCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: GAGAAG-CAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86893167|gb|CI313351.1|CI313351
EST:     CGAGAAGCAGGGAGTGATTCGTGGAACCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88834218|gb|CI000582.1|CI000582
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86861222|gb|CI328037.1|CI328037
EST:     CGAGAAGCAGGGAGTGATTCGT-GAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29670253|gb|CB666528.1|CB666528
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|40493989|gb|BX901803.1|BX901803
EST:     CGAGAACCAGGGAGTGATTCGTGGAACCAGTACATGAGGAGGCCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86430515|gb|CI082938.1|CI082938
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29619465|gb|CB624477.1|CB624477
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88905899|gb|CI089485.1|CI089485
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGTTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29617472|gb|CB622484.1|CB622484
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29670275|gb|CB666550.1|CB666550
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86492111|gb|CI134744.1|CI134744
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86525160|gb|CI165366.1|CI165366
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|15858562|gb|BI811374.1|BI811374
EST:     GAGAAGCACGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: GAGAAGCA-GGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29663941|gb|CB660216.1|CB660216
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88251101|gb|CI349331.1|CI349331
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88511229|gb|CI438735.1|CI438735
EST:     AGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: AGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86434828|gb|CI106061.1|CI106061
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTGTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|89166746|gb|CI104032.1|CI104032
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86413205|gb|CI067610.1|CI067610
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88506414|gb|CI433920.1|CI433920
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86851925|gb|CI316494.1|CI316494
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29629464|gb|CB634473.1|CB634473
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29656048|gb|CB652323.1|CB652323
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29664016|gb|CB660291.1|CB660291
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86845912|gb|CI347145.1|CI347145
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29639263|gb|CB644272.1|CB644272
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29673830|gb|CB670105.1|CB670105
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29613124|gb|CB618137.1|CB618137
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86432477|gb|CI086088.1|CI086088
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGTACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|33677828|gb|CF306067.1|CF306067
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29628533|gb|CB633544.1|CB633544
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATAAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29631159|gb|CB636168.1|CB636168
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29663978|gb|CB660253.1|CB660253
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88465378|gb|CI529598.1|CI529598
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88976985|gb|CI257681.1|CI257681
EST:     CGAGAACCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86426989|gb|CI072086.1|CI072086
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|89162077|gb|CI103613.1|CI103613
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86431473|gb|CI085084.1|CI085084
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88966674|gb|CI365897.1|CI365897
EST:     GAGAAGCCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCTCTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: GAGAAG-CAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29677489|gb|CB673764.1|CB673764
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|8528195|gb|AU093010.1|AU093010
EST:     CGAGAAGCAGGGAGTGATTCGTGGAANCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCNCAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|89196044|gb|CI395462.1|CI395462
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88907644|gb|CI090438.1|CI090438
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTGTGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29656046|gb|CB652321.1|CB652321
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCTCTTG                         TACGATCACCTATGGAAGCGAGCTGCCTTTAGCCCAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88955701|gb|CI091990.1|CI091990
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29612883|gb|CB617896.1|CB617896
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|89195196|gb|CI051309.1|CI051309
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88903571|gb|CI089109.1|CI089109
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86841365|gb|CI336388.1|CI336388
EST:     CGAGAAGCAGGGAGTGATTCGTGGAACCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|58691415|gb|CK080102.1|CK080102
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29668605|gb|CB664880.1|CB664880
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29667911|gb|CB664186.1|CB664186
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29623916|gb|CB628927.1|CB628927
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86506109|gb|CI148742.1|CI148742
EST:     AGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: AGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|15855596|gb|BI808408.1|BI808408
EST:     CGAGAAGCAGGGAGTGATTCGTGGAA-CAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29667685|gb|CB663960.1|CB663960
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29628522|gb|CB633533.1|CB633533
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29664485|gb|CB660760.1|CB660760
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|15854707|gb|BI807519.1|BI807519
EST:     GAGAAGCACGGGAGTGATTCGTGGAA-CAGTACATGAGGAGGGCCACTTG                         TACGATCCACTATGGAAGCGAGCTGCCTCTAGCACACAGGAATAAATTTTG
genomic: GAGAAGCA-GGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACA-AGGAATAAATTTTG
EST: gi|33683879|gb|CF312118.1|CF312118
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|86427320|gb|CI072417.1|CI072417
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29673253|gb|CB669528.1|CB669528
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29672296|gb|CB668571.1|CB668571
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29668614|gb|CB664889.1|CB664889
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TCCGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88848589|gb|CI087111.1|CI087111
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTNGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|29663939|gb|CB660214.1|CB660214
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|89173106|gb|CI040999.1|CI040999
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
EST: gi|88848224|gb|CI086746.1|CI086746
EST:     CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTG                         TACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG
genomic: CGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 65 (upstream exon), 75 (downstream exon)
Score: 29

GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagac ... atttctgcagTACGATCAACTATGGAAGCGAGCTGCCTCTAGCACAAGGAATAAATTTTGGCTAGTTCGGTGGTCAAGATCGGCTGATGAACATGTTAAGCTTCATCGAC




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTGCTGAAATTGGTGGAGCTTTTGGTGGAGAAAAAGCTACTGGTGGTGGACGAGAAGCAGGGAGTGATTCGTGGAAGCAGTACATGAGGAGGGCCACTTGgtaagtagacaaattttgattcaagtatgcaagctataccttgatcaattggtaaaattcctagttccttttgcacttttcccaagttgtcgtttgcaac

- - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAG