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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgctccccattgatttccgatatttttgcataaaaatttagattggtggattccctatattttagctgaaataattatagcagtgtggactgtg...

Basic information

species Oryza sativa
transcript LOC_Os06g02380.2
intron # 13
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os06g02380.1 (Oryza sativa), 5'ss of exon 13
lower sequence: GRMZM2G083716_T03 (Zea mays), 5'ss of exon 12
GTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgctccccattgatttccgatatttttgcataaaaatttagattggtggattccctatattt-tagctgaaata-attatagcagtgt-ggactgtg
|| || ||||| ||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||| ||||| ||| ||  ||  | | || || || | | ||| | ||  | ||| | | |||  |  | |  | | ||    |   |  ||     |   | || ||   
GTCCTTTCTAATGATAACTTCAAGTATGGTTACAATGCTGCTACTGGACAGTACGAGGACCTGATGGCTGCTGGTATCATTGACCCCACCAAGgtttgtggc--cctgtggcttccctatctgtctgcttgaat-tctagttggttggtcttgcaacttctgtaatcaatgcatgttcccctaccattgggcttca

upper sequence: LOC_Os06g02380.1 (Oryza sativa), 5'ss of exon 13
lower sequence: GRMZM2G095252_T02 (Zea mays), 5'ss of exon 7
GTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgctccccattgatttccgatatttttgcataaaaatttagattggtggattccctatatt--ttagctgaaataattatagcagtgtggactgtg
|| || ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||||| ||| || ||  |    ||||| ||  || ||| | || | |    || || |  |    |  |   | | |     || ||         ||  ||   
GTCCTTTCTAACGATAACTTCAAGTATGGTTACAATGCTGCTACTGGACAGTACGAGGACTTGATGGCTGCTGGTATCATTGATCCTACTAAGgtttgtggc-cctaaggcttttcctatccttctgcttgaatactatagttagttggcttggaacttcggtcatcaatgctagttccctaccattgagcttc-

upper sequence: LOC_Os06g02380.1 (Oryza sativa), 5'ss of exon 13
lower sequence: AT1G55490.1 (Arabidopsis thaliana), 5'ss of exon 13
GTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttg-ctccccattgatttccgatatttttgcataaaaatttagattggtggattccctatattttagctgaaataattatagcagtgtggactgtg
|| || || ||||||||| | || || ||||||||||||||||| ||  |||||||||||||||||||||| || ||||| || || || |||||  |||  ||   |||  |       | | |||||     || || |          ||| |  |  | || ||   | ||  |     |          
GTGCTTTCCAACGATAACGTGAAATTCGGTTACAATGCTGCAACCGGCAAGTACGAGGATTTGATGGCTGCAGGAATCATCGATCCAACAAAGgtaagttttctgtgcatatacagaaactgtctttgctagctaaattggtcatcaaagatccatgaacctgag-tggctttatcttgattttag--------

upper sequence: LOC_Os06g02380.1 (Oryza sativa), 5'ss of exon 13
lower sequence: AT5G56500.2 (Arabidopsis thaliana), 5'ss of exon 13
GTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgctccccattgatttccgatatttttgcataaaa-atttagattggtggattccctatattttagctgaaataattatagcagtgtggactgtg
||||| ||||  || |||   ||   |||||||||||||||||||||  | ||||| ||| | |||||||| || |||||||| || || || ||  |       || ||  |||   | || ||   ||      ||| |  || |        | | || |     |                         
GTTCTTTCTAGTGACAACCCTAAACATGGTTACAATGCTGCAACTGGCAAATACGAAGATCTCATGGCTGCAGGAATCATTGATCCAACCAAAgtgagcaaagttcc-ttactttttcacatattgaaatctgctgtttcgggtgctaaccgagttttcttcttttcaag------------------------

upper sequence: LOC_Os06g02380.1 (Oryza sativa), 5'ss of exon 13
lower sequence: Vv09s0002g03930.t01 (Vitis vinifera), 5'ss of exon 12
GTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgctccccattgat-ttccgatatttttgcataaaaatttagattggtggattccctatattttagctgaaataattatagcagtgtggactgtg
||  | || |  || ||    || | |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| ||||| || ||  |||  ||     || |  |  || || |      |||   |   |   ||||| | |  || ||  |||  | ||| | |   |       | ||  
GTGTTGTCCAGTGACAATCCAAAATATGGTTACAATGCTGCAACTGGAAAATACGAGGATTTGATGGCTGCTGGTATAATTGATCCCACGAAAgtaagtttttcttggatggtgctttgacatgtagctgcaaattatgtaacctgtggaattcaaat-ttcaagcctatatactcaactccagacccattgat

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88834230|gb|CI000594.1|CI000594
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|30227511|gb|CB965403.1|CB965403
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86501965|gb|CI144598.1|CI144598
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACAGGCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|15856036|gb|BI808848.1|BI808848
EST:     TGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACCTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGT-GCCACAGACATTCC
genomic: TGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCA-CTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCA-AGACATTCC
EST: gi|29627635|gb|CB632646.1|CB632646
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29625231|gb|CB630242.1|CB630242
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86541129|gb|CI181335.1|CI181335
EST:     CAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         TTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|18386667|gb|BM419865.1|BM419865
EST:     TGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAATG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCT
genomic: TGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAA-Ggtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCT
EST: gi|22306957|gb|BQ908179.1|BQ908179
EST:     TGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: TGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29622749|gb|CB627760.1|CB627760
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|58693690|gb|CK082377.1|CK082377
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86256570|gb|CI061333.1|CI061333
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|58670426|gb|CK059112.1|CK059112
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|58605075|gb|CK033108.1|CK033108
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29673297|gb|CB669572.1|CB669572
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88466081|gb|CI519954.1|CI519954
EST:     ACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTTTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: ACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29661803|gb|CB658078.1|CB658078
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|33675796|gb|CF304035.1|CF304035
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88515191|gb|CI442845.1|CI442845
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29618035|gb|CB623047.1|CB623047
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88842350|gb|CI081606.1|CI081606
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|89169455|gb|CI109814.1|CI109814
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88985200|gb|CI006854.1|CI006854
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29634248|gb|CB639257.1|CB639257
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88276316|gb|CI396920.1|CI396920
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|23513161|gb|BU673011.1|BU673011
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATGGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86499526|gb|CI142159.1|CI142159
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86884449|gb|CI337017.1|CI337017
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88830095|gb|CI074767.1|CI074767
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88275711|gb|CI396315.1|CI396315
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86487425|gb|CI130058.1|CI130058
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|3761242|gb|C98490.1|C98490
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86525693|gb|CI165899.1|CI165899
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88219467|gb|CI219027.1|CI219027
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86541186|gb|CI181392.1|CI181392
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88216810|gb|CI216412.1|CI216412
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88829359|gb|CI074229.1|CI074229
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29657689|gb|CB653964.1|CB653964
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCCCTAAG                         GTGGTGAGATGTTGTTTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88215089|gb|CI214938.1|CI214938
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29615270|gb|CB620282.1|CB620282
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|21236658|gb|AJ309287.1|AJ309287
EST:     TGGAAC-GTACGAGGATTTGATGGCTGCTGGTATCATTGA-CCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: TGG-ACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29625766|gb|CB630777.1|CB630777
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29683173|gb|CB679448.1|CB679448
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88901541|gb|CI008969.1|CI008969
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29624254|gb|CB629265.1|CB629265
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86524993|gb|CI165199.1|CI165199
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86907854|gb|CI298707.1|CI298707
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|3761784|gb|C99032.1|C99032
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88964796|gb|CI084794.1|CI084794
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|6934892|gb|AU082429.1|AU082429
EST:     CTGGNCAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGNCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|89187117|gb|CI047184.1|CI047184
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCCCTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88828182|gb|CI000291.1|CI000291
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|89183846|gb|CI046411.1|CI046411
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|23514492|gb|BU673667.1|BU673667
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86527219|gb|CI167425.1|CI167425
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|2801013|gb|AA754307.1|AA754307
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTSMCCC-ACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88995753|gb|CI037119.1|CI037119
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88218730|gb|CI218579.1|CI218579
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATGGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29680784|gb|CB677059.1|CB677059
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29627873|gb|CB632884.1|CB632884
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29616041|gb|CB621053.1|CB621053
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCAT
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCAT
EST: gi|86495883|gb|CI138516.1|CI138516
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|702958|gb|D49249.1|D49249
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|89169996|gb|CI039273.1|CI039273
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86427955|gb|CI073052.1|CI073052
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29628205|gb|CB633216.1|CB633216
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88258596|gb|CI361182.1|CI361182
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|6934805|gb|AU082342.1|AU082342
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86417592|gb|CI031801.1|CI031801
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29689313|gb|CB685588.1|CB685588
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88977070|gb|CI024807.1|CI024807
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86854677|gb|CI258970.1|CI258970
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|14713978|gb|AU197921.1|AU197921
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29614381|gb|CB619394.1|CB619394
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|701315|gb|D47606.1|D47606
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTNCCTCGGTGGCCAAGAC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGAC
EST: gi|86870382|gb|CI319488.1|CI319488
EST:     CTGGACANTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88831284|gb|CI082094.1|CI082094
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86413936|gb|CI068143.1|CI068143
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88845219|gb|CI084144.1|CI084144
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|16753384|gb|BM037777.1|BM037777
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88983089|gb|CI020653.1|CI020653
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|58689772|gb|CK078459.1|CK078459
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88841873|gb|CI081129.1|CI081129
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|6934895|gb|AU082432.1|AU082432
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88959891|gb|CI381769.1|CI381769
EST:     TGGACAGTACGAGGATTTGATGGCCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: TGGACAGTACGAGGATTTGATGG-CTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86882772|gb|CI327390.1|CI327390
EST:     CTGGACAGTACCAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGTTGAGATGTTTTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88483746|gb|CI421017.1|CI421017
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|89174985|gb|CI041063.1|CI041063
EST:     CTGGACCGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCCCTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|6934907|gb|AU082444.1|AU082444
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCNTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|2801009|gb|AA754303.1|AA754303
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTSMCCC-ACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29658823|gb|CB655098.1|CB655098
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTTTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86420211|gb|CI055012.1|CI055012
EST:     GGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: GGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|7212775|gb|C99033.2|C99033
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88962701|gb|CI023801.1|CI023801
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86417759|gb|CI031968.1|CI031968
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88992144|gb|CI035282.1|CI035282
EST:     AGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         NTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: AGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|30228060|gb|CB965952.1|CB965952
EST:     GGACAGTAGCGAGGATTTGATGGCTGCTGGTATCATTGACCCCACATAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCT
genomic: GGACAGTA-CGAGGATTTGATGGCTGCTGGTATCATTGACCCCAC-TAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCT
EST: gi|29657719|gb|CB653994.1|CB653994
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88844914|gb|CI022268.1|CI022268
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|89173511|gb|CI041404.1|CI041404
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|218494239|gb|FG952759.1|FG952759
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|89197101|gb|CI021941.1|CI021941
EST:     GAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: GAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|30229232|gb|CB967123.1|CB967123
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29617291|gb|CB622303.1|CB622303
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88832741|gb|CI369631.1|CI369631
EST:     CTGGACAGTACGAGGATTTTATGGCTGCTGGTATCATTGACCCCACTAA-                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|58687214|gb|CK075901.1|CK075901
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCCAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|58690595|gb|CK079282.1|CK079282
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86907404|gb|CI296481.1|CI296481
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|86428383|gb|CI075064.1|CI075064
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29616042|gb|CB621054.1|CB621054
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88906400|gb|CI375472.1|CI375472
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|29626463|gb|CB631474.1|CB631474
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|88836755|gb|CI014756.1|CI014756
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
EST: gi|6934809|gb|AU082346.1|AU082346
EST:     CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAG                         GTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC
genomic: CTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 75 (downstream exon)
Score: 281

GTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgct ... tgggcaacagGTGGTGAGATGTTGTCTTGAGCATGCTGCGTCGGTGGCCAAGACATTCCTCACATCGGATGTCGTCGTCGTCGAGATCAAGGAGCCTGAGCCTGCGCCCG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTTCTCTCTAACGATAACTTCAAGTTTGGTTACAATGCTGCAACTGGACAGTACGAGGATTTGATGGCTGCTGGTATCATTGACCCCACTAAGgtctgttgctccccattgatttccgatatttttgcataaaaatttagattggtggattccctatattttagctgaaataattatagcagtgtggactgtg

- - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT