1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ATAGGGACCGCCGCCATGATCGCGATCGGGATAGAGATTATGACCGTTCGCGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttcaatggtttctttgctcacttctctctgcctttcttgtatagcgatttattccgaccataaacttttgacagtataatgacaaagaaacacaatgaaattatctgcttttgatatggaaacctttatatcactaggagctaacattagacagttgttattttcag
species | Oryza sativa |
transcript | LOC_Os03g62640.2 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCCCAG GCCCCACGATANATACTGAATCTGGTGCTCCATGATGGCTGATTTTGAAGTEST: gi|29665629|gb|CB661904.1|CB661904
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88515580|gb|CI443234.1|CI443234
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCCCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86502553|gb|CI145186.1|CI145186
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88295664|gb|CI530227.1|CI530227
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88478005|gb|CI415276.1|CI415276
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88477396|gb|CI414667.1|CI414667
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|18385491|gb|BM418690.1|BM418690
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88446499|gb|CI536530.1|CI536530
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88268607|gb|CI378542.1|CI378542
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|55409535|gb|CV721911.1|CV721911
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: GGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86887183|gb|CI325998.1|CI325998
genomic: GGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88663675|gb|CI484912.1|CI484912
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|87008593|gb|CI315051.1|CI315051
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88289186|gb|CI553162.1|CI553162
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88446058|gb|CI552564.1|CI552564
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|3767788|gb|AU031815.1|AU031815
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATNTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88528009|gb|CI456209.1|CI456209
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATANATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88520887|gb|CI448541.1|CI448541
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88455344|gb|CI519365.1|CI519365
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88842454|gb|CI081710.1|CI081710
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88469590|gb|CI406861.1|CI406861
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88448238|gb|CI541824.1|CI541824
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88517125|gb|CI444607.1|CI444607
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88662304|gb|CI466723.1|CI466723
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88319289|gb|CI515750.1|CI515750
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88479846|gb|CI417117.1|CI417117
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88529949|gb|CI458307.1|CI458307
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88319497|gb|CI518341.1|CI518341
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88526700|gb|CI454778.1|CI454778
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88223512|gb|CI223361.1|CI223361
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|58682879|gb|CK071566.1|CK071566
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88662984|gb|CI476257.1|CI476257
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86846273|gb|CI339860.1|CI339860
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86838448|gb|CI327797.1|CI327797
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CTTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88518874|gb|CI446528.1|CI446528
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86499113|gb|CI141746.1|CI141746
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|218504071|gb|FG966298.1|FG966298
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88504355|gb|CI431861.1|CI431861
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88374419|gb|CI515903.1|CI515903
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88319174|gb|CI513238.1|CI513238
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88662512|gb|CI470251.1|CI470251
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88482770|gb|CI420041.1|CI420041
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88960782|gb|CI382463.1|CI382463
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACCTTCTCGATCCAGGGAGCCCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86886570|gb|CI322802.1|CI322802
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGCCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88554007|gb|CI484155.1|CI484155
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88516405|gb|CI444059.1|CI444059
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|29664073|gb|CB660348.1|CB660348
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88662215|gb|CI465258.1|CI465258
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88511327|gb|CI438833.1|CI438833
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88841254|gb|CI080708.1|CI080708
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|30227731|gb|CB965623.1|CB965623
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|29661288|gb|CB657563.1|CB657563
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88664125|gb|CI490903.1|CI490903
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CNTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88513165|gb|CI440671.1|CI440671
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|27554295|gb|CA998195.1|CA998195
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88294969|gb|CI522923.1|CI522923
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88524634|gb|CI453473.1|CI453473
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86866011|gb|CI336775.1|CI336775
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAA-GGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGGCTCCATGATGGCTGATTTTGGAGEST: gi|88661489|gb|CI455581.1|CI455581
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGT-GCTCCATGATGGCTGATTTTGGAG
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88661526|gb|CI456109.1|CI456109
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88662044|gb|CI463027.1|CI463027
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88662947|gb|CI475865.1|CI475865
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88474040|gb|CI411311.1|CI411311
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88366566|gb|CI556350.1|CI556350
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88439936|gb|CI543853.1|CI543853
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86493823|gb|CI136456.1|CI136456
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86871357|gb|CI329754.1|CI329754
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88384170|gb|CI548511.1|CI548511
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88221770|gb|CI221726.1|CI221726
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|86256324|gb|CI012614.1|CI012614
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATTCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGTEST: gi|88304265|gb|CI515538.1|CI515538
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGCTGATTTTGGAGT
EST: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAG GCGCCACGATAGATACTGAATCTGGTGCTCCATGATGGGCTGATTTTGGAG
genomic: CGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttca ... ttattttcagGCGCCACGATAGATACTGAATCTGGTGCTCCATGAT-GGCTGATTTTGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAGGGACCGCCGCCATGATCGCGATCGGGATAGAGATTATGACCGTTCGCGTGGCCATGATTCAAGGAGAAGGGAACGTTCTCGATCCAGGGAGCGCAGgtatggttcaatggtttctttgctcacttctctctgcctttcttgtatagcgatttattccgaccataaacttttgacagtataatgacaaagaaacacaatgaaattatctgcttttgatatggaaacctttatatcactaggagctaacattagacagttgttattttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA