Skip to another splice site:
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 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGCTTTATACAGGAGGGCCCAAGCTTACATGCAACTTGCTGACCTAGAGTTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttgtatatgcgtctccccaagggaggcatactagttttagtagtcactccattttgaaactgatcttgtcactgcttatcttcag

Basic information

species Oryza sativa
transcript LOC_Os08g41390.2
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os08g41390.1 (Oryza sativa), 5'ss of exon 11
lower sequence: GRMZM2G096585_T04 (Zea mays), 5'ss of exon 11
AGGCTTTATACAGGAGGGCCCAAGCTTACATGCAACTTGCTGACCTAGAGTTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgca-agttttgtatatgcgtctccccaagggaggca-tactagttttagtagtcactcc----attttgaaactgatcttgtcactgcttatcttcag
||||| | ||||||||||  ||||||||||| |||||||||||||||||| |||||||||  ||||| || |||||||| ||||| |||||||| |||||| | ||| | | | ||| |  ||  |||||  |||| ||||  | |||    |||| |     |||||| ||   |||                    
AGGCTCTCTACAGGAGGGTGCAAGCTTACATTCAACTTGCTGACCTAGAGCTAGCAGAGGCCGATATCAAAAAGGCACTGGAAATCGATCCTGACAACAGgtacagtctaggaaatg-gattctgcaaggcgggcagtactcttattacgtatcacgctgataattttggaaacaatcccag----------------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|38476999|gb|CF961132.1|CF961132
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCCAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88993419|gb|CI257847.1|CI257847
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88849052|gb|CI087574.1|CI087574
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86431729|gb|CI085340.1|CI085340
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88437227|gb|CI526376.1|CI526376
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86260084|gb|CI065957.1|CI065957
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88902626|gb|CI088164.1|CI088164
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|15008565|gb|AU222953.1|AU222953
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|9788929|gb|BE530939.1|BE530939
EST:     GATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: GATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88324667|gb|CI537859.1|CI537859
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88263384|gb|CI367158.1|CI367158
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|58677606|gb|CK066293.1|CK066293
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88838444|gb|CI374992.1|CI374992
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88971270|gb|CI387195.1|CI387195
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88220221|gb|CI219781.1|CI219781
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88275689|gb|CI396293.1|CI396293
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|3761233|gb|C98481.1|C98481
EST:     CCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: CCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88990391|gb|CI107817.1|CI107817
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|8956117|gb|BE229921.1|BE229921
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|8956253|gb|BE230057.1|BE230057
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|9864969|gb|AU100719.1|AU100719
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86251598|gb|CI016887.1|CI016887
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88850040|gb|CI091335.1|CI091335
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88956613|gb|CI092817.1|CI092817
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88285995|gb|CI515119.1|CI515119
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86884733|gb|CI313112.1|CI313112
EST:     TTACCAGAGGTGGATATTAAGAAGGCACTTTAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88846189|gb|CI372957.1|CI372957
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|3767320|gb|AU031430.1|AU031430
EST:     TAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGAT-CCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89179973|gb|CI044252.1|CI044252
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88964928|gb|CI097796.1|CI097796
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|11565319|gb|AU165955.1|AU165955
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88272984|gb|CI388440.1|CI388440
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86431722|gb|CI085333.1|CI085333
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89193937|gb|CI018255.1|CI018255
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89186021|gb|CI047890.1|CI047890
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89191965|gb|CI393322.1|CI393322
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATTTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86601155|gb|CI356912.1|CI356912
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86541196|gb|CI181402.1|CI181402
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GAATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88322268|gb|CI537851.1|CI537851
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88321332|gb|CI535284.1|CI535284
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88265528|gb|CI376430.1|CI376430
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|8956869|gb|BE230672.1|BE230672
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88265212|gb|CI368986.1|CI368986
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86871712|gb|CI331089.1|CI331089
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88955694|gb|CI091983.1|CI091983
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88907973|gb|CI090569.1|CI090569
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|29615642|gb|CB620654.1|CB620654
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGACCCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|29688010|gb|CB684285.1|CB684285
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88274868|gb|CI388326.1|CI388326
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|3760324|gb|C97578.1|C97578
EST:     TTAGCAGAGGTGGATATTAAGAAGGCNCTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGNGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88457466|gb|CI536864.1|CI536864
EST:     GGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         N
genomic: GGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcag-
EST: gi|88457466|gb|CI536864.1|CI536864
EST:     GGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         N
genomic: GGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcag-
EST: gi|88466748|gb|CI542325.1|CI542325
EST:     GAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: GAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86485797|gb|CI128430.1|CI128430
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88964214|gb|CI045407.1|CI045407
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86433146|gb|CI093489.1|CI093489
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88252497|gb|CI350925.1|CI350925
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88902953|gb|CI088491.1|CI088491
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86600913|gb|CI356670.1|CI356670
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88906044|gb|CI089630.1|CI089630
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTTAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|8956257|gb|BE230061.1|BE230061
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88964707|gb|CI070053.1|CI070053
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88959931|gb|CI381809.1|CI381809
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88846639|gb|CI373407.1|CI373407
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|3767305|gb|AU031415.1|AU031415
EST:     TTAGCAGAGGTGGATATTANGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGNACCTCAAGGNAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88849726|gb|CI089832.1|CI089832
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|10794585|gb|AU108551.1|AU108551
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88450881|gb|CI531476.1|CI531476
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86854433|gb|CI256555.1|CI256555
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|8956727|gb|BE230530.1|BE230530
EST:     GCAAGAAGGTGGATATTAAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAAGTTGACATACAAAGAACCTCAAGG
genomic: GCA-GA-GGTGGATATTAA-GAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAA-GTTGACATACAA-GAACCTCAAGG
EST: gi|88272359|gb|CI386214.1|CI386214
EST:     ATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: ATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86484224|gb|CI126857.1|CI126857
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|29628611|gb|CB633622.1|CB633622
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88437705|gb|CI533662.1|CI533662
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88902497|gb|CI088035.1|CI088035
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGGAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88304670|gb|CI520525.1|CI520525
EST:     GGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: GGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88448080|gb|CI541666.1|CI541666
EST:     AGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: AGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88419904|gb|CI516353.1|CI516353
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86903036|gb|CI324506.1|CI324506
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89194351|gb|CI116788.1|CI116788
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|58599011|gb|CK009539.1|CK009539
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88983060|gb|CI250664.1|CI250664
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88290942|gb|CI545039.1|CI545039
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88382589|gb|CI535797.1|CI535797
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86427975|gb|CI073072.1|CI073072
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88243528|gb|CI243925.1|CI243925
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|29675036|gb|CB671311.1|CB671311
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86873811|gb|CI341244.1|CI341244
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86837933|gb|CI343280.1|CI343280
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|58604776|gb|CK015304.1|CK015304
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88903094|gb|CI088632.1|CI088632
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86867342|gb|CI337826.1|CI337826
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTAAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|66923788|gb|CX110636.1|CX110636
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAAGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|218497051|gb|FG946048.1|FG946048
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|8527773|gb|AU092588.1|AU092588
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88842738|gb|CI371638.1|CI371638
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88903089|gb|CI088627.1|CI088627
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89176179|gb|CI043200.1|CI043200
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|163929135|gb|EG712660.1|EG712660
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|29630490|gb|CB635499.1|CB635499
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGACCCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|86592330|gb|CI250984.1|CI250984
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88463302|gb|CI524612.1|CI524612
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|58605743|gb|CK033776.1|CK033776
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|8857068|gb|AU094386.1|AU094386
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88374335|gb|CI513422.1|CI513422
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89178241|gb|CI391420.1|CI391420
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88961920|gb|CI097073.1|CI097073
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88375182|gb|CI523447.1|CI523447
EST:     AATTGATCCTGATAACCAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACA
genomic: AATTGATCCTGATAA-CAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACA
EST: gi|86488523|gb|CI131156.1|CI131156
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88852496|gb|CI374264.1|CI374264
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88455409|gb|CI519430.1|CI519430
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATNTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88957731|gb|CI095505.1|CI095505
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88413542|gb|CI526104.1|CI526104
EST:     AGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: AGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88459593|gb|CI519654.1|CI519654
EST:     AAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: AAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|29666722|gb|CB662997.1|CB662997
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88366093|gb|CI548340.1|CI548340
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89184415|gb|CI046980.1|CI046980
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|29624444|gb|CB629455.1|CB629455
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|88435958|gb|CI516494.1|CI516494
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89192306|gb|CI049767.1|CI049767
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|89179813|gb|CI044092.1|CI044092
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA
EST: gi|29675020|gb|CB671295.1|CB671295
EST:     TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAG                         GGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTTCAA
genomic: TTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttg ... ttatcttcagGGATGTGAAGTTGACATACAAGAACCTCAAGGAAAAGGTCAAGGAGTACAA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGGCTTTATACAGGAGGGCCCAAGCTTACATGCAACTTGCTGACCTAGAGTTAGCAGAGGTGGATATTAAGAAGGCACTTGAAATTGATCCTGATAACAGgcaagttttgtatatgcgtctccccaagggaggcatactagttttagtagtcactccattttgaaactgatcttgtcactgcttatcttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG