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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacatactatattccttagcattgtaccaaccattcttttatatgagcttaatgtcacatcaattatctcgcag

Basic information

species Oryza sativa
transcript LOC_Os06g40940.3
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: GRMZM2G104310_T02 (Zea mays), 5'ss of exon 10
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacata-ctatattc--cttagcattgtaccaaccattc--ttttatatgagctta--atgtcacatcaatt-atctcg-cag
||| |||||||| ||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||     |  | |   || | || ||   ||   | || ||  ||  | |   ||| | |||||||||  || ||  | |  ||  ||| | |||
TGTGGCAAAGCGCTTGATGGACTACGGGTTCCACGCACCGACCATGTCATGGCCTGTTCCTGGCACACTTATGATTGAACCAACTGAAAGTGAGAGCAAGgtaagcatgtgcagcttttaaccatcttttgctccccgttctatgaattagttgatttcacatgagcttacaatatcgtaccgttttgtcttggcag

upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: GLYMA06G05470.1 (Glycine max), 5'ss of exon 13
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacatactat--attccttagcattgtaccaaccattcttttatatgagcttaatgtcacatcaattatctcgcag
||||||||||||| | ||||||||||| ||||||   || || |||||||  ||||| || |||||||| |||||||||||||||||||||||||||||||||  |    ||  || | || |   |   |||  | ||||||   | ||  | | | ||   ||| |  |||  | ||     | ||||
TGTTGCAAAGCGTCTTATGGACTATGGCTTCCATAGTCCGACAATGTCATTTCCTGTGCCCGGCACACTCATGATTGAACCAACTGAAAGTGAAAGCAAGgtatgattacaatccagaaacgagtgacctcttttctttgtactttctatcatgtaaaattttctttaattcaactaaaaatcattgcag

upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: GLYMA14G10820.1 (Glycine max), 5'ss of exon 12
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacatactatattcctta-gcattgtaccaaccattcttttatatgagcttaatgtcacatcaattatctcgcag----------
||||||||||||  | |||||||| || || |||||||| || |||||||||||||| || |||||||| |||||||| || ||||| |||||||||||||||    |||   | |  || | |  |  | | ||    |        |   ||| | || |  |||| ||   | ||||       |           
TGTTGCAAAGCGCCTCATGGACTACGGTTTTCATGCACCAACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAGCCTACTGAGAGTGAAAGCAAGgtaccttactgggaaat-tattgtccttatgatgcccctttttctttgtaactttttgtgtgactaatttcttcttaattcaactaaacatcattgcag

upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: GLYMA04G05420.1 (Glycine max), 5'ss of exon 12
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacatactat--attccttagcattgtaccaaccattcttttatatgagcttaatgtcacatcaattatctcgcag
||||||||||||  | ||||||||||| ||||||   || || |||||||  ||||| || |||||||| |||||||| ||||||||||||||||||||||||  |    ||     |  | |   |   |||  | ||||||   | ||  | | | ||   ||| |  |||  | ||     | ||||
TGTTGCAAAGCGCCTTATGGACTATGGTTTCCATAGTCCGACAATGTCATTTCCTGTGCCTGGCACACTCATGATTGAGCCAACTGAAAGTGAAAGCAAGgtatgattacaatctggaatcgagtgacctcttttctttgtactttctatcatgtaaaattttctttaattcaactaaacatcattgcag

upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: GLYMA17G34690.1 (Glycine max), 5'ss of exon 12
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacatactatattccttagcattgtaccaaccattcttttatatgagcttaatgtcacatcaattatctcgcag---------------------
||||||||||||  | |||||||| || || |||||||| || |||||||||||||| || |||||||| |||||||| |||||||| |||||||||||||||  ||  ||    | | | |||  ||||||      |     || || || | | | |  ||  ||| |  | | ||||     |                      
TGTTGCAAAGCGCCTCATGGACTACGGTTTTCATGCACCAACAATGTCATGGCCTGTGCCTGGCACACTCATGATTGAGCCAACTGAGAGTGAAAGCAAGgtattaccttactgga-aaattattgtcctta------tgatgcccctttttctttgtaaattttttgtgaactaatttattctttaattcaactaaacatcattgcag

upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: AT4G33010.2 (Arabidopsis thaliana), 5'ss of exon 11
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacatactatattccttagcattgtaccaaccattcttttatatgagcttaatgtcac--atcaattatc--tcgcag
||| || || ||  | ||||||||||||||||||| ||| || ||||| |||||||| || || || ||||||||||| ||||| || |||||||||||||||||  |   | | |   |      || ||  |  | |        |     | ||| | ||| |||  ||  |  |||  ||  | ||||
TGTGGCGAAACGGCTAATGGACTATGGATTCCATGGACCCACAATGTCTTGGCCTGTCCCTGGAACTCTTATGATTGAGCCAACCGAGAGTGAAAGCAAGgtaaa-tatggatatatgcagatctctcattgactctttctt----ctctcagtgtatcaacttgatgaaactaaataatattcgtttgcag

upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: AT2G26080.1 (Arabidopsis thaliana), 5'ss of exon 12
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaa---acactaaaacacatactatattccttagcattgtaccaaccattcttttatatg-agcttaatgtcacatcaattatctcgcag--------
||| || || || |||||||| ||||| ||||||| ||| || ||||| |||||||| || || || |||||||| || ||||| ||||| |||||||||||||        |  |   |||   | ||  || |       | |   || ||| | | |    |||| ||      |  ||      | |         
TGTGGCCAAACGATTGATGGATTATGGTTTCCATGGACCGACAATGTCTTGGCCTGTCCCTGGAACGCTTATGATCGAGCCAACCGAAAGCGAAAGCAAGgtaattatgtcttgcattgcattgcaaatctctcactgactcagctctcagtctctaaaacatggcttcataatttgtatatatatatgtaatatttcag

upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: Vv04s0008g01300.t01 (Vitis vinifera), 5'ss of exon 12
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacac-taaaacacatactatattccttagcattgtaccaaccattcttttat--atgagcttaatgt-cacatcaattatctcgcag
| |||| |||||| | |||||||||||||| |||| ||| || ||||||||||| || || || ||||| ||||||||||| |||||||||||||||||||||     |   |   | || ||   ||  | | | ||  |    || ||||| |     |||  || | ||     |   |||  |  |||
TATTGCTAAGCGTCTTATGGACTATGGATTTCATGGACCGACAATGTCATGGCCAGTGCCTGGTACACTCATGATTGAACCCACTGAAAGTGAAAGCAAGgtatgcttcaccagggaaattcttcttttttcatcttttcatactcctttcttcttctagtgaattttaagtgtgtttgttttacttttcag

upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: Vv11s0016g02280.t01 (Vitis vinifera), 5'ss of exon 13
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacatactatattccttagcattgtaccaaccattcttttatatgagcttaatgtcacatcaattatctcgcag
|||||| || ||| | ||||| ||||| |||||||  || || ||||| ||||| || ||||| ||||| ||||||||||| ||||||||||||||||||||  || |  | |||     || |||| ||   | || |      || |  || |  | |    | |||   | |   | | | ||||
TGTTGCTAAACGTCTCATGGATTATGGGTTCCATGGGCCAACAATGTCCTGGCCAGTACCAGGAACACTCATGATTGAACCCACTGAAAGTGAAAGCAAGgtttaa-ataataaccttctctttatttct---cgttctttttgtcagt--ttaaagtaaatggattgtttgaacttct-ttttgcag

upper sequence: LOC_Os06g40940.3 (Oryza sativa), 5'ss of exon 11
lower sequence: EFJ19263 (Selaginella moellendorffii), 5'ss of exon 12
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacatactatattccttagcattgtaccaaccattcttttatatgagcttaatgtcacatcaattatctcgcag
 |||||||||||| | || ||||| || || ||||| || |||||||| ||||| ||||  || ||| | ||||| |||||||| ||||| || ||||||||| | || ||   ||       | ||  |||    ||||   | |||  || | |   ||                           
CGTTGCAAAGCGTCTAATCGACTACGGCTTTCATGCGCCAACTATGTCTTGGCCAGTTCATGGGACATTGATGATCGAACCAACAGAAAGCGAGAGCAAGgtacagcaatatgtcat-cctggttttgtttatgcatgtattcatcatgtttgtctcacag---------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|2427539|gb|C72002.1|C72002
EST:     CAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTNATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: CAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|87040355|gb|CI194977.1|CI194977
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGTAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88671280|gb|CI724326.1|CI724326
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|38482097|gb|CF966155.1|CF966155
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|29669108|gb|CB665383.1|CB665383
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGACCTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88673270|gb|CI725969.1|CI725969
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTACACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86517310|gb|CI157516.1|CI157516
EST:     AACTGAAAGTGAAAGCAAG                         TCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: AACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88954693|gb|CI720200.1|CI720200
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGT
EST: gi|89171310|gb|CI720369.1|CI720369
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTC
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTC
EST: gi|8955592|gb|BE229398.1|BE229398
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|163925435|gb|EG715352.1|EG715352
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88954517|gb|CI718496.1|CI718496
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTC
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTC
EST: gi|86513158|gb|CI155791.1|CI155791
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCGACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|87027671|gb|CI274235.1|CI274235
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAGTT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88955245|gb|CI721817.1|CI721817
EST:     GGCCTGTCCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCA
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCA
EST: gi|29616407|gb|CB621419.1|CB621419
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86518227|gb|CI158433.1|CI158433
EST:     ACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: ACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|87035873|gb|CI190495.1|CI190495
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTGGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|29682836|gb|CB679111.1|CB679111
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|87038349|gb|CI192971.1|CI192971
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTGGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|58608897|gb|CK036930.1|CK036930
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GGCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|8956357|gb|BE230160.1|BE230160
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86513364|gb|CI155997.1|CI155997
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86513650|gb|CI156283.1|CI156283
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|33380464|gb|CF195807.1|CF195807
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86518237|gb|CI158443.1|CI158443
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86513724|gb|CI156357.1|CI156357
EST:     TTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: TTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|33380360|gb|CF195703.1|CF195703
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|29686762|gb|CB683037.1|CB683037
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|11442755|gb|BF430658.1|BF430658
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88593937|gb|CI713891.1|CI713891
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTG
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTG
EST: gi|38477829|gb|CF961962.1|CF961962
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAGGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86494597|gb|CI137230.1|CI137230
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|58608408|gb|CK036441.1|CK036441
EST:     GAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGGAAGAAAT
genomic: GAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCA-GGGAAGAAAT
EST: gi|87036386|gb|CI191008.1|CI191008
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTGGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATG
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88231719|gb|CI231568.1|CI231568
EST:     AACTGAAAGTGAAAGCAAG                         CCCGAACTAGATAGGTCCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: AACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|15857796|gb|BI810608.1|BI810608
EST:     ACTGAAAGTGAAA-C-A-                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: ACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|11564752|gb|AU165388.1|AU165388
EST:     AACTGAAAGTGAAAGCAAG                         GCCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAG-AAT
genomic: AACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagG-CCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAAT
EST: gi|58660009|gb|CK048689.1|CK048689
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAGGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88670427|gb|CI724543.1|CI724543
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|38479996|gb|CF964085.1|CF964085
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88595302|gb|CI714123.1|CI714123
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGC
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGC
EST: gi|33380386|gb|CF195729.1|CF195729
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86517651|gb|CI157857.1|CI157857
EST:     CTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: CTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|38477511|gb|CF961644.1|CF961644
EST:     GGACTGTTCCAGGCACACTTATGATTGAACCAAGTGAAAGTGAAAGCAAG                         GGCGAACTCGATAGGTTCTGTGATGCTCTAATC
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATC
EST: gi|89172339|gb|CI721398.1|CI721398
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|11442994|gb|BF430882.1|BF430882
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|87008434|gb|CI301192.1|CI301192
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86520273|gb|CI160479.1|CI160479
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86521109|gb|CI161315.1|CI161315
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|58593567|gb|CF991875.1|CF991875
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|29613348|gb|CB618361.1|CB618361
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86520101|gb|CI160307.1|CI160307
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86519176|gb|CI159382.1|CI159382
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86251796|gb|CI018988.1|CI018988
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|38482218|gb|CF966270.1|CF966270
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAGGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86513323|gb|CI155956.1|CI155956
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|38483215|gb|CF967017.1|CF967017
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86519179|gb|CI159385.1|CI159385
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88674653|gb|CI728766.1|CI728766
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCCGAACTAGA
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCC-GAACTAGA
EST: gi|58606076|gb|CK034109.1|CK034109
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GGCGAACTAGACAGGTTCTGTGATGCTCTAATCT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCT
EST: gi|86514021|gb|CI156654.1|CI156654
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88904659|gb|CI711958.1|CI711958
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCT
EST: gi|38481288|gb|CF965377.1|CF965377
EST:     GGCCTGTTCCAGGCACGCTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86517834|gb|CI158040.1|CI158040
EST:     CCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: CCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86520317|gb|CI160523.1|CI160523
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|38479825|gb|CF963914.1|CF963914
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|29659170|gb|CB655445.1|CB655445
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|29657499|gb|CB653774.1|CB653774
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTACACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|58692092|gb|CK080779.1|CK080779
EST:     GGCCTGTTCCAGGCACACTTATGATTGAATCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|29634278|gb|CB639287.1|CB639287
EST:     TGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: TGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86517640|gb|CI157846.1|CI157846
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86478211|gb|CI120844.1|CI120844
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|29613424|gb|CB618437.1|CB618437
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|14713855|gb|AU197816.1|AU197816
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|89172655|gb|CI721714.1|CI721714
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGACAGGTTCTGTGATGCTCTA
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTA
EST: gi|117231955|gb|CT853890.1|CT853890
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|8954573|gb|BE228319.1|BE228319
EST:     GGCCTGTTCCAGGCACACTTATGATTGANCCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCNGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86518006|gb|CI158212.1|CI158212
EST:     CAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: CAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86521139|gb|CI161345.1|CI161345
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|88231479|gb|CI231328.1|CI231328
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86828167|gb|CI276786.1|CI276786
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86517232|gb|CI157438.1|CI157438
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|58691718|gb|CK080405.1|CK080405
EST:     CCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: CCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|86518001|gb|CI158207.1|CI158207
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|38470435|gb|CF954566.1|CF954566
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
EST: gi|29616450|gb|CB621462.1|CB621462
EST:     GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAG                         GCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT
genomic: GGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacact ... tatctcgcagGCCGAACTAGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGgtaaaacactaaaacacatactatattccttagcattgtaccaaccattcttttatatgagcttaatgtcacatcaattatctcgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG