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AGGTAGCCTATACAGGATTTTGCACAAGCATGGTGCAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGgtaaaatcatatatacttatctcaatacagaatttaggtctaacagaatgactggacatatgctttatataaagtaaaggttgaccgtagaatcaaaattgtaggtgcttctttataaaaatcattgattttgtgtaccttcgtatccag
species | Oryza sativa |
transcript | LOC_Os02g32610.3 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTG GCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGGEST: gi|33675051|gb|CF303290.1|CF303290
genomic: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGgtaaaatcat ... tcgtatccagGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGG
EST: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTG GCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGGEST: gi|29665412|gb|CB661687.1|CB661687
genomic: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGgtaaaatcat ... tcgtatccagGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGG
EST: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTG GCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCAEST: gi|29664339|gb|CB660614.1|CB660614
genomic: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGgtaaaatcat ... tcgtatccagGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCA
EST: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTG GCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGGEST: gi|58595275|gb|CF993583.1|CF993583
genomic: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGgtaaaatcat ... tcgtatccagGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGG
EST: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTG GCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGG
genomic: CAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGgtaaaatcat ... tcgtatccagGCTAAGGGGATGAATTACCTTCACAAGCGCAATCCTCCTATAGTCCACCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGTAGCCTATACAGGATTTTGCACAAGCATGGTGCAAGGGAAAATCTAGATGAGAAGCGGCGATTGAGTATGGCTTTTGACGTGgtaaaatcatatatacttatctcaatacagaatttaggtctaacagaatgactggacatatgctttatataaagtaaaggttgaccgtagaatcaaaattgtaggtgcttctttataaaaatcattgattttgtgtaccttcgtatccag
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