1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GAAACAATCCAAGCAACTGAAGGTTACCTGCAACTTGAACAATGCTGCCTGCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcagttcttcctgcaaaagacccatttgttatgtgttttggtaaaccaaggtaacattctggtgtttgttgccag
species | Oryza sativa |
transcript | LOC_Os08g41390.2 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88993419|gb|CI257847.1|CI257847
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88849052|gb|CI087574.1|CI087574
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86260084|gb|CI065957.1|CI065957
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88902626|gb|CI088164.1|CI088164
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: AGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88263384|gb|CI367158.1|CI367158
genomic: AGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: AAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTC-AGGCTTTATACAGGAGGGCCCAAEST: gi|58677606|gb|CK066293.1|CK066293
genomic: AAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88220221|gb|CI219781.1|CI219781
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88990391|gb|CI107817.1|CI107817
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|8956117|gb|BE229921.1|BE229921
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|8956253|gb|BE230057.1|BE230057
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|9864969|gb|AU100719.1|AU100719
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86251598|gb|CI016887.1|CI016887
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88850040|gb|CI091335.1|CI091335
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88956613|gb|CI092817.1|CI092817
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: CTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCCAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|42592116|gb|CK738602.1|CK738602
genomic: CTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86884733|gb|CI313112.1|CI313112
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: CTGAAAGA-TACAACCAAGCTGAGAAGCTTTCCACCAA- GTTCTGGAACTTGACAGCCAAAATGTCAATGCTTTATACAGGAGGGCCCAAEST: gi|3767320|gb|AU031430.1|AU031430
genomic: CTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGANGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|89179973|gb|CI044252.1|CI044252
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88964928|gb|CI097796.1|CI097796
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCATGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86431722|gb|CI085333.1|CI085333
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|89193937|gb|CI018255.1|CI018255
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|89186021|gb|CI047890.1|CI047890
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: TGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCCAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88265212|gb|CI368986.1|CI368986
genomic: TGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: AGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88955694|gb|CI091983.1|CI091983
genomic: AGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88907973|gb|CI090569.1|CI090569
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: AGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|29615642|gb|CB620654.1|CB620654
genomic: AGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|3760324|gb|C97578.1|C97578
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCNCCAAG GTTCTGGAACTTGACAGCCAAAATNTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86485797|gb|CI128430.1|CI128430
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: CAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88964214|gb|CI045407.1|CI045407
genomic: CAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCCAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86433146|gb|CI093489.1|CI093489
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: AAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88902953|gb|CI088491.1|CI088491
genomic: AAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88906044|gb|CI089630.1|CI089630
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: AGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|8956257|gb|BE230061.1|BE230061
genomic: AGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88964707|gb|CI070053.1|CI070053
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88849726|gb|CI089832.1|CI089832
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|10794585|gb|AU108551.1|AU108551
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: CAAGCTGAAGCTGAAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGNCAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86854433|gb|CI256555.1|CI256555
genomic: CAAGCTGAAGCTG-AAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|8956727|gb|BE230530.1|BE230530
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86484224|gb|CI126857.1|CI126857
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: AGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|29628611|gb|CB633622.1|CB633622
genomic: AGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88902497|gb|CI088035.1|CI088035
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCTAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|58599011|gb|CK009539.1|CK009539
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88983060|gb|CI250664.1|CI250664
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86427975|gb|CI073072.1|CI073072
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88243528|gb|CI243925.1|CI243925
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|29675036|gb|CB671311.1|CB671311
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86837933|gb|CI343280.1|CI343280
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: CTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|58604776|gb|CK015304.1|CK015304
genomic: CTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88903094|gb|CI088632.1|CI088632
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: AAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|58695816|gb|CK084503.1|CK084503
genomic: AAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGEST: gi|66923788|gb|CX110636.1|CX110636
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGG
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|218497051|gb|FG946048.1|FG946048
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|8527773|gb|AU092588.1|AU092588
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88903089|gb|CI088627.1|CI088627
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACCTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|89176179|gb|CI043200.1|CI043200
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|163929135|gb|EG712660.1|EG712660
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: CTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|29630490|gb|CB635499.1|CB635499
genomic: CTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTCCAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|86592330|gb|CI250984.1|CI250984
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCTAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|8956562|gb|BE230477.1|BE230477
genomic: GCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCANEST: gi|8956166|gb|BE229970.1|BE229970
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAATCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88961920|gb|CI097073.1|CI097073
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: TGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|88957731|gb|CI095505.1|CI095505
genomic: TGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|29666722|gb|CB662997.1|CB662997
genomic: GAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|89184415|gb|CI046980.1|CI046980
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|29624444|gb|CB629455.1|CB629455
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|89192306|gb|CI049767.1|CI049767
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|89179813|gb|CI044092.1|CI044092
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAAEST: gi|29675020|gb|CB671295.1|CB671295
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
EST: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAG GTTCTGGAACTTGCCAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
genomic: GCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcag ... ttgttgccagGTTCTGGAACTTGACAGCCAAAATGTCAAGGCTTTATACAGGAGGGCCCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAACAATCCAAGCAACTGAAGGTTACCTGCAACTTGAACAATGCTGCCTGCAAGCTGAAGCTGAAAGATTACAAGCAAGCTGAGAAGCTTTGCACCAAGgtacattcagttcttcctgcaaaagacccatttgttatgtgttttggtaaaccaaggtaacattctggtgtttgttgccag
- - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC