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GGCTGACTGCACGAATAATCAATGAAACAAATTCTATGGCTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAGgtagatctggagtattatcttctttagcattcactatgttgggtaaaataagataaaatatgttaatttttaacagctcatctctacactagtatgtagt...
species | Oryza sativa |
transcript | LOC_Os07g10130.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAG ATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCAEST: gi|87028062|gb|CI257222.1|CI257222
genomic: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAGgtagatctgg ... actgtttcagATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCA
EST: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAG ATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCAEST: gi|218505007|gb|FG953269.1|FG953269
genomic: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAGgtagatctgg ... actgtttcagATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCA
EST: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAG ATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCAEST: gi|88849994|gb|CI091289.1|CI091289
genomic: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAGgtagatctgg ... actgtttcagATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCA
EST: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAG ATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCAEST: gi|29615456|gb|CB620468.1|CB620468
genomic: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAGgtagatctgg ... actgtttcagATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCA
EST: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAG ATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCA
genomic: CTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAGgtagatctgg ... actgtttcagATTGATGATAATGATCCAAATGCGTCGCTTACACGGAAACGTGTGAATGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCTGACTGCACGAATAATCAATGAAACAAATTCTATGGCTGATGTGTACACTGCTTTCTATGAATTCTCTTCACTGCTTGCAGAAAAGgtagatctggagtattatcttctttagcattcactatgttgggtaaaataagataaaatatgttaatttttaacagctcatctctacactagtatgtagt
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