1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
AATATCTTGGTTGTTTCGAAGTACTATTCAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttcccagccttcctagcatcacttgtattcctcttgttactttgtagcctaccaagatctaacatgccccacatttttctcattcaggag
species | Oryza sativa |
transcript | LOC_Os03g63430.2 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88666183|gb|CI716339.1|CI716339
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGNGTAAACTCAAAGTCGCTGTTTGCEST: gi|88671843|gb|CI725378.1|CI725378
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATG-GTAAACTCAAAGTCGCTGATTGC
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|89173252|gb|CI721082.1|CI721082
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCACATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88668545|gb|CI719502.1|CI719502
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88850202|gb|CI091695.1|CI091695
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88244531|gb|CI243653.1|CI243653
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: TGAAGAGGCTCGCAGATCTTCTTGGCTTGAGCTTGCAGGAGEST: gi|86895618|gb|CI315936.1|CI315936
genomic: TGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88909038|gb|CI716762.1|CI716762
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88672218|gb|CI726334.1|CI726334
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|86538133|gb|CI178339.1|CI178339
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88249884|gb|CI249733.1|CI249733
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88671842|gb|CI725377.1|CI725377
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|86890279|gb|CI321456.1|CI321456
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: TTGCTTGAGCTTGCAGGAGEST: gi|29664786|gb|CB661061.1|CB661061
genomic: TTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCGEST: gi|88272155|gb|CI388208.1|CI388208
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|29678375|gb|CB674650.1|CB674650
genomic: CGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88233122|gb|CI232971.1|CI232971
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88668239|gb|CI722978.1|CI722978
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88673479|gb|CI727592.1|CI727592
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCACAGTCGCTGTTTGCGEST: gi|88594922|gb|CI715078.1|CI715078
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88973665|gb|CI718093.1|CI718093
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88666273|gb|CI716429.1|CI716429
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|29620777|gb|CB625788.1|CB625788
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|86537599|gb|CI177805.1|CI177805
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88202525|gb|CI200880.1|CI200880
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|86835535|gb|CI347992.1|CI347992
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88903498|gb|CI089036.1|CI089036
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|5803423|gb|AI978393.1|AI978393
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCGEST: gi|86429895|gb|CI082318.1|CI082318
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88594377|gb|CI714335.1|CI714335
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|86415189|gb|CI069592.1|CI069592
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88987972|gb|CI018027.1|CI018027
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88993508|gb|CI110329.1|CI110329
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: ATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88905110|gb|CI712409.1|CI712409
genomic: ATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|87029623|gb|CI257418.1|CI257418
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88671603|gb|CI725477.1|CI725477
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|29645308|gb|CB650315.1|CB650315
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCGEST: gi|29637545|gb|CB642554.1|CB642554
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|86538105|gb|CI178311.1|CI178311
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|86413420|gb|CI067825.1|CI067825
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: AAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCGAAGEST: gi|88244685|gb|CI243807.1|CI243807
genomic: AAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCGAAG
EST: GCTTGAGCTTGCAGGAGEST: gi|88677287|gb|CI729945.1|CI729945
genomic: GCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88672862|gb|CI726978.1|CI726978
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|86482148|gb|CI124781.1|CI124781
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88245517|gb|CI245366.1|CI245366
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|5002921|gb|AU068030.1|AU068030
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|89190909|gb|CI392762.1|CI392762
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CTGAGGAGGCTCGCAGATCTTC-TTGCTTGAGCTTGCAGGAGEST: gi|88671927|gb|CI725869.1|CI725869
genomic: CTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88676318|gb|CI730431.1|CI730431
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|27547668|gb|CA765594.2|CA765594
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88955676|gb|CI091965.1|CI091965
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: GAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88245532|gb|CI245381.1|CI245381
genomic: GAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88668077|gb|CI722816.1|CI722816
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88668946|gb|CI719903.1|CI719903
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|86430906|gb|CI083329.1|CI083329
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|25803582|gb|CA759543.1|CA759543
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|86414709|gb|CI069112.1|CI069112
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: AGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|10930623|gb|AU160897.1|AU160897
genomic: AGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88595329|gb|CI714150.1|CI714150
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|89180554|gb|CI044833.1|CI044833
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: GAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|89187486|gb|CI114446.1|CI114446
genomic: GAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: TCTTTGCTTGAGCTTGCAGGAGEST: gi|88671341|gb|CI723517.1|CI723517
genomic: TCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88905414|gb|CI712713.1|CI712713
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88972672|gb|CI717398.1|CI717398
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|6799243|gb|AU082194.1|AU082194
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88908759|gb|CI714901.1|CI714901
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88595223|gb|CI714044.1|CI714044
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88247845|gb|CI247694.1|CI247694
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88905676|gb|CI712975.1|CI712975
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88905977|gb|CI089563.1|CI089563
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: TTCTTTGCTTGAGCTTGCAGGAGEST: gi|86522196|gb|CI162402.1|CI162402
genomic: TTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|86431173|gb|CI083596.1|CI083596
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|29664483|gb|CB660758.1|CB660758
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCGEST: gi|88246291|gb|CI246140.1|CI246140
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|88594302|gb|CI714260.1|CI714260
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|88669890|gb|CI724006.1|CI724006
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGTTTGCGEST: gi|86426641|gb|CI071738.1|CI071738
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGGAGEST: gi|300215653|gb|HO088279.1|HO088279
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGC---AGgtttgtgttc ... cattcagg
EST: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAG GAGGCAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
genomic: CAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttc ... cattcaggagG---CAGAGAAACACCTTTCGGACATGGTAAACTCAAAGTCGCTGATTGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATATCTTGGTTGTTTCGAAGTACTATTCAAGGATTACCCTGAAGAGGCTCGCAGATCTTCTTTGCTTGAGCTTGCAGgtttgtgttcccagccttcctagcatcacttgtattcctcttgttactttgtagcctaccaagatctaacatgccccacatttttctcattcaggag
- - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT